Gene Information

Name : Daci_4178 (Daci_4178)
Accession : YP_001565194.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Unknown
Product : putative signal peptide
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4568256 - 4568705 bp
Length : 450 bp
Strand : +
Note : KEGG: har:HEAR2019 conserved hypothetical protein; putative signal peptide

DNA sequence :
ATGCCCTCGAACTTGAATAGCTGGGCTCAGGGCCTGGCGCTGGCCTTGGCCGTCGCGCTGCTCGGTGGCTGCGCCACCAG
CAAGGAAAAGCTGCTGACCCACGGAGACAGCACGATGATGAACATCTGGCAGCAGAACGCCGGCGACGGCGGCGGTGGTG
CCGGCCAGGTAGCGCGCAGGCAGTTGCTCGATGCGCGCCAGAGCCTGCGCAGGCCGCTGACCGAGATGGACGTGCAGGCC
GCGCCTGCCGAGCAGATGCGCTACACGCGCACGGCGCGCAACGAGGTCTACCGCCAGTTCCAGCGCCTGCCCAACCCCGA
TCTCGTGATGTACGTGTATCCGCATTTGGCGGGCACCGACCCAGTGCCGATTCCGGGCTATACGACCGTGTTCCCGCTGT
ACCAGCGCGTGCAGTACGCCATGCCAGGCGAGCGCGTGGAGGATTACTGA

Protein sequence :
MPSNLNSWAQGLALALAVALLGGCATSKEKLLTHGDSTMMNIWQQNAGDGGGGAGQVARRQLLDARQSLRRPLTEMDVQA
APAEQMRYTRTARNEVYRQFQRLPNPDLVMYVYPHLAGTDPVPIPGYTTVFPLYQRVQYAMPGERVEDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C48 AAN62142.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-46 90
ORF SG58 AAN62280.1 hypothetical protein Not tested PAGI-3(SG) Protein 7e-39 70
pph83 CAI36124.1 signal recognition particle GTPase Not tested PPHGI-1 Protein 8e-36 63
unnamed ABR13363.1 hypothetical protein Not tested PAGI-5 Protein 2e-32 62
EXA34 ABD94643.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-35 62
RL023 AAP84150.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-34 61
PMI2577 YP_002152296.1 lipoprotein Not tested Not named Protein 3e-26 52
Pmu_03080 YP_005176207.1 conjugative transfer region lipoprotein Not tested ICEPmu1 Protein 2e-18 46
STY4571 NP_458656.1 putative lipoprotein Not tested SPI-7 Protein 4e-25 45
t4267 NP_807866.1 lipoprotein Not tested SPI-7 Protein 4e-25 45
YpsIP31758_3706 YP_001402660.1 lipoprotein Not tested YAPI Protein 4e-21 43
YE3483 YP_001007642.1 putative lipoprotein Not tested YAPI Protein 1e-20 43
api38 CAF28512.1 putative lipoprotein Not tested YAPI Protein 1e-21 43