Gene Information

Name : Daci_4177 (Daci_4177)
Accession : YP_001565193.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4566866 - 4568275 bp
Length : 1410 bp
Strand : +
Note : KEGG: rme:Rmet_2351 putative secreted protein

DNA sequence :
ATGCGCAGTAACGGACTCCTGAAGTGGCTGCTGATCCCCGTGGCCCTGCTGGTGCTGTTTGTCGCCATCCGGCTGTTTTC
CGGTGGCGGTGCGTCGGCACCGCCTGTCGCGGATGGCGGCGGCAGGCTTACGCCGGAAGAAATGAAGGCGCTGGGCATCG
AGGGTGACACCCCGCGCGACACCGTGGCGACGCTGGTTGCCCAGGTGAAGCAGTTGCGCACCGAGCTTCAGACCGCGCTG
TCCGACAACAGGTCGCAGCGTGAGGAGAACCAGCGACTGCGCCAGCGCGAGAACGCCATCGACCAACGCATCAGTTCCGC
CCTCGAATCCGAGCGCTCCAACCTGCGCCGCGACCAACAGCAGGCGGCCAGCGCGCGCCAGCAGACCGAGGGGCTGCTCG
CTGACCTGCAGCAGCGCCTGGACAGCATCGGCGGGCGTGGCGGCGGCCATGCCGATTTGCCGGTGGGGCTGGGCCTGCGT
GACGGCGACGAGGCCGGCATGGAAGGCGGTATGCGCTGGGTGGAGCCGGATGACGCGAAACAAAGCGACGGGCGTGGCAG
GTCGAATGGCGGCATAAGCTTCCCCACCAGCTTCGGTTCCGCACAGAGCACGCTGGAAACCACAGCGCAAACCGTGGCGA
ACGCGGGCGCACGCGCGGCAGGCGTCAAGAGCCCGACGCCCGTCTATACCGTGCCGACCAACTCGACGCTGATGGGGTCG
GTGGCGATGACGGCGCTGATTGGCCGCGTGCCGATCGACGGCACGGTGAACGATCCATACCCCTTCAAGGTCTTGGTCGG
GCCTGACAATTTGACCGCGAACGGCATCGACATTCCCGATGTGGCCGGGGCCGTGTTCTCCGGCACCGCATCGGGCGACT
GGACGCTCTCCTGCGTGCGCGGCCAGGTGCGCAGCATCACCTTCGTGTTCCATGACGGGACCATCCGCACCATCCCCGAG
GATCGTGAGGGCAACCAGCAGAACAACCAACAACGCGACGGCCTGGGCTGGATCAGCGACCCGCACGGCATTCCCTGTGT
CAGCGGCGAGCGGCGCAGCAATGCGCAGCAGTACCTCGGCACCCAGGCGCTGATCACGGCGGCTGGGGCTGGCGTGGCCT
CGCTGATCGAATCCGACAGTGGCAGGGCGTCCTATGTCGGCGCCGACGGCTCCATCGGCAGCGTGGGCATCAGCGGCCAG
GAAGCCGTGGGCCGGATTCTCGCCAGCGGCGTCCAGGACATGTCGAGCTGGGTCAACAAGCTCTACGGCCAGGCCTTCGC
TGCCGTTTATGTGCAGCCCGGTGCCAAGGTCGCCGTCCACCTCGAAAAGCCGCTCGCCATCGACTTCGATCCCGAAGGCC
GCAAGGTCGATCACCGCGCAGGAGAAAGCCATGCCCTCGAACTTGAATAG

Protein sequence :
MRSNGLLKWLLIPVALLVLFVAIRLFSGGGASAPPVADGGGRLTPEEMKALGIEGDTPRDTVATLVAQVKQLRTELQTAL
SDNRSQREENQRLRQRENAIDQRISSALESERSNLRRDQQQAASARQQTEGLLADLQQRLDSIGGRGGGHADLPVGLGLR
DGDEAGMEGGMRWVEPDDAKQSDGRGRSNGGISFPTSFGSAQSTLETTAQTVANAGARAAGVKSPTPVYTVPTNSTLMGS
VAMTALIGRVPIDGTVNDPYPFKVLVGPDNLTANGIDIPDVAGAVFSGTASGDWTLSCVRGQVRSITFVFHDGTIRTIPE
DREGNQQNNQQRDGLGWISDPHGIPCVSGERRSNAQQYLGTQALITAAGAGVASLIESDSGRASYVGADGSIGSVGISGQ
EAVGRILASGVQDMSSWVNKLYGQAFAAVYVQPGAKVAVHLEKPLAIDFDPEGRKVDHRAGESHALELE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C49 AAN62143.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 92
ORF SG59 AAN62281.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-143 73
pph82 CAI36123.1 hypothetical protein Not tested PPHGI-1 Protein 4e-102 49
RL024 AAP84151.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-96 49
unnamed ABR13364.1 hypothetical protein Not tested PAGI-5 Protein 3e-100 47
EXA35 ABD94644.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-100 47
PMI2579 YP_002152298.1 hypothetical protein Not tested Not named Protein 4e-74 41
YpsIP31758_3707 YP_001402661.1 hypothetical protein Not tested YAPI Protein 3e-76 41
api37 CAF28511.1 putative exported protein Not tested YAPI Protein 4e-77 41
YE3484 YP_001007643.1 hypothetical protein Not tested YAPI Protein 2e-70 41