Gene Information

Name : Daci_4176 (Daci_4176)
Accession : YP_001565192.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Unknown
Product : putative signal peptide
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4565938 - 4566876 bp
Length : 939 bp
Strand : +
Note : KEGG: har:HEAR2017 conserved hypothetical protein; putative signal peptide

DNA sequence :
ATGAAGCCCATGAAGCATCCTGTACTCGCGCTGCTGGGGCTGCTGGCCGTGGCCGCCGCAGTGGTCGTGTCCCCCGCTGT
CCAGGCGGTGGAGATCCTGCGTTGGGAGCGCATGCCGCTGGCGGTGCCGTTGAAGGTCGGCCAGGAGCGCATCGTGTTCA
TCGACCGAAACGTCCGCGTGGGCGTTCCCGCAGGCGTCGGTGAGCGCTTGCGCGTGCAGAGCGCGGGCGGCGCGGTGTAC
CTGCGCGCCAGCGAGCCGATCGAGCCCACTCGGCTGCAATTGCAGGACGCCGACACCGGCGCGCTGATCCTGCTCGACAT
TGCGGCGGAGCCGCCCAAGGACGGCGAAGCCGAGCTGGAACCGGTGCGAATCGTCGAGGGCAACAACTCAACAGCGCGCT
ATGGCGATCAGCCTGACGGTGCCGATGCGCCCCATGCACGCGCTCAGGAGCAGGCGGGCACCCGGACGGCGCGGCGCGAA
ACGCCAATCCCCGTCGTGCTGACACGTTTTGCTGCGCAGAACCTCTACGCACCGCTGCGCACCGTGGAAGCCTTGCCAGG
CGTCATGCGGGTCAACCTGCGCCGCGACCTCGACCTCGGCACGCTGATGCCGACCTTGCCGGCACGCGCGGTCGCGCTCG
CCTCGTGGCGCCTGGAAGACCAGTGGGTCACTGCCGTGCGCCTGACCAACAGTAGCAACGACTGGATCAGCCTCGACCCG
CGCGTGCTGCAAGGGGATTTCCTCACCGCCACCTTCCAGCACGAGGCGCTTGGCCCGCGCGGAACCCCCGAGGACACCAC
CGTCCTGTACCTGGTGACGCGCGGGCACGGCCTCGCGCAATCGCTGCTGCCGGCGATCCATCGCTTCGACCCCGCTGTGC
ATCTCCCGCAGCCCAAAGCAGCAGCCAGCGACGACAGGGAGGCCCGCCATGCGCAGTAA

Protein sequence :
MKPMKHPVLALLGLLAVAAAVVVSPAVQAVEILRWERMPLAVPLKVGQERIVFIDRNVRVGVPAGVGERLRVQSAGGAVY
LRASEPIEPTRLQLQDADTGALILLDIAAEPPKDGEAELEPVRIVEGNNSTARYGDQPDGADAPHARAQEQAGTRTARRE
TPIPVVLTRFAAQNLYAPLRTVEALPGVMRVNLRRDLDLGTLMPTLPARAVALASWRLEDQWVTAVRLTNSSNDWISLDP
RVLQGDFLTATFQHEALGPRGTPEDTTVLYLVTRGHGLAQSLLPAIHRFDPAVHLPQPKAAASDDREARHAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 8e-117 89
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-73 64
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-72 58
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 1e-71 58
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 9e-72 58
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 6e-76 58
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 8e-52 51
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 8e-52 51
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 8e-52 49
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 2e-51 49
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 7e-52 48
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 3e-51 47
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 4e-49 43