Gene Information

Name : Daci_4171 (Daci_4171)
Accession : YP_001565187.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4563839 - 4564222 bp
Length : 384 bp
Strand : +
Note : PFAM: plasmid conserved hypothetical protein RAQPRD; KEGG: har:HEAR2012 conserved hypothetical protein; putative signal peptide

DNA sequence :
ATGTTGGCTCCGATCTGGCTGCGCGCCGCGCATCGCGGCGTGCCAACTTTTCTCGTGACGGCCCTGCTGATGGGTCAGTT
CCCGGTTGCCTTGGCCGAATCCCCGGCACAGCGCCAGGAGCTGGTTGCCGCGCTACGCCAGCTCGACGCGCTGGAGCGCA
CCATCGCGGATGGCGCTGCACACGCACCCATCCAGCCGGGCGAGCGCTACCACTTCGATTACCCACGACTGCTGGCTGAT
CTGGCGCGTGTGCGCGCCGGCATCCAGGCCTATCTCACACCGTCGCGCGCCCAGCCACGCGACCTCTCCGAACTGGCTGG
TGAGTACCGCACCGAGCGGACCGCCCCGCCATCGCTGCCGACGACTGCGCAGGGCAGACCATGA

Protein sequence :
MLAPIWLRAAHRGVPTFLVTALLMGQFPVALAESPAQRQELVAALRQLDALERTIADGAAHAPIQPGERYHFDYPRLLAD
LARVRAGIQAYLTPSRAQPRDLSELAGEYRTERTAPPSLPTTAQGRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C55 AAN62149.1 hypothetical protein Not tested PAGI-2(C) Protein 6e-44 86
EXA41 ABD94650.1 conserved hypothetical protein Not tested ExoU island A Protein 6e-16 48
RL030 AAP84157.1 candidate type III effector Hop protein Not tested PAPI-1 Protein 2e-16 48
unnamed ABR13370.1 hypothetical protein Not tested PAGI-5 Protein 2e-16 47
pph76 CAI36117.1 candidate type III effector Hop protein Not tested PPHGI-1 Protein 3e-15 42