|
Name : Daci_4167 (Daci_4167) Accession : YP_001565183.1 Strain : Delftia acidovorans SPH-1 Genome accession: NC_010002 Putative virulence/resistance : Unknown Product : lytic transglycosylase catalytic subunit Function : - COG functional category : - COG ID : - EC number : - Position : 4559644 - 4560249 bp Length : 606 bp Strand : + Note : PFAM: Lytic transglycosylase catalytic; KEGG: bxe:Bxe_A1197 hypothetical protein DNA sequence : ATGGCAGCGCCAGCCATAGCGGCCACCTCCGTTTCGCAGTGCTTGCGCGCACTGGTGATCGCGGCGGGCCTGTGCGCCTG CGCCGCCCATGCCCAGGAGCTTCCGCCACCGGCTTACCAGCTTGCCGCACAGCGCGCGGGCATCCCCTCGACGGTGCTCT ACGCCGTGGCTTTGCAGGAAAGCGGCATCCGCCGCAACGGGCGCATCGTCCCGTGGCCGTGGTCCCTCAACGTCGCCGGT CAGTCGCGCCGCTTCACCACCCGTGCCGACGCCTGCGCTGGTTTGCAGCAGGCAATGCGCGCCACGCCGCACACACGCAT CGACGCGGGCCTGGGCCAGATCAACCTCGGCTACCACCAGCAGCGCTACGCCAGCCCGTGCGACCTGCTCGACCCATACA GCAACCTCGCCATCGCCGCTGAAATCCTGAAAGAGCAGCACACCTCGGGCGAGGACTGGTTGCCGGCGATCGGTCGCTAC CACCGTCCTGCGGGCGGAGAACCTGCGGCTCGTTACCGGCGCAGCGTGTCGCGCCACCTTGCCCGTGTGCAGGGCACACA CCCAACCGCCGCGGCCATCGCCGTGCACCAGGAGAGCACCCCATGA Protein sequence : MAAPAIAATSVSQCLRALVIAAGLCACAAHAQELPPPAYQLAAQRAGIPSTVLYAVALQESGIRRNGRIVPWPWSLNVAG QSRRFTTRADACAGLQQAMRATPHTRIDAGLGQINLGYHQQRYASPCDLLDPYSNLAIAAEILKEQHTSGEDWLPAIGRY HRPAGGEPAARYRRSVSRHLARVQGTHPTAAAIAVHQESTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C67 | AAN62161.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 3e-70 | 84 |
| ORF SG70 | AAN62292.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 2e-57 | 80 |
| pph70 | CAI36111.1 | soluble lytic murein transglycosylase | Not tested | PPHGI-1 | Protein | 2e-44 | 59 |
| unnamed | ABR13378.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 2e-32 | 50 |
| RL050 | AAP84175.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 2e-32 | 50 |
| EXA50 | ABD94659.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 2e-35 | 49 |
| PMI2591 | YP_002152310.1 | lytic transglycosylase | Not tested | Not named | Protein | 8e-25 | 42 |
| STY4559 | NP_458645.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-23 | 41 |
| t4257 | NP_807855.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-23 | 41 |
