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Name : Daci_4161 (Daci_4161) Accession : YP_001565177.1 Strain : Delftia acidovorans SPH-1 Genome accession: NC_010002 Putative virulence/resistance : Unknown Product : helicase domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG0553 EC number : - Position : 4552056 - 4553858 bp Length : 1803 bp Strand : + Note : PFAM: helicase domain protein; KEGG: rme:Rmet_2330 helicase-like protein DNA sequence : ATGCTGTTCCCGTTCATCCGAGGACACCACCATGTGCAGCCCACGGGCCAGGAGTTTTTCATCCTGGGGCGCGTCAGGAT GCGGATGGGGTTCCACTGGAAACCTGTCTTCACCCAGCGGCGCACCCGCCACGGCGACGTGGCAGCCTGCCCGGACTGCG GCACACTCATCACCGACCTCGACGGCGAGCCGGTCAACCCGGTCGCGCTCGAAGCCGAGGAGTCCCGCAGGAAGTGCAGC CACTGCGCCGCGCCCCTGTGGACGCTGATCCGCCCGCGTAGCCTGTCCGGCAGCGACCAGTCCTCGGTCGTCCTCAAAGC CTTGAAGCGCATCCCGACCATCGGGGAAGTCACTGCACAGAAGCTGATGCAGAAGTTCGGTGACGGCTTCCTGGCCTCGA TGCTGGGCGACAACATCCATGAGTTCATCAACCTCATGGATGGCAACGGCGAGCTGGTGTTTTCCGACCGTCAGGCCACG CGCATGGAACGTGCGATGGCCAACATGGAGTTTGGCTTTGGCGAAGGCGGCTACCAACCGTCCGAGTTCATCAAACGCTA CCTACCGCAAGGCACGTTCGACCTGCTCATCGCCGACGAGGCGCACGAGTACAAGAACGGTGGCAGTGCCCAGGGCCAGG CCATGGGCGTGCTGGCGGCGAAGGCTCGCAAGACCTTGCTGCTGACCGGCACGCTGATGGGCGGCTACGGCGATGATCTG TTCTACCTGCTGTTCCGGGCACTGCCCGGACGGATGATCGAAGACGGCTACCGCCCGACCACGAGCGGCAGCATGACCTC GGCTGCGATGGCATTCATGCGCGATCACGGCGTCCTCAAGGACATCTACTCCGAGAGCGCCGGCACGGCGCACAAGACAG CCAAAGGCACCAAGGTATCGGTGCGCACGGTCAAGGCTCCCGGCTTCGGCCCGAAAGGCGTCTTGCGCTGCATCCTGCCG TTTACGATTTTCCTCAAGCTCAAGGACATCGGTGGCAACGTCCTGCCGCCGTATGACGAGGAGTTTCGTGAAGTCCAGAT GGACGTGGCGCAAGCTGCGGCCTACCGCGATCTGGCGGGTCGGCTGACCGCAGAACTGAAACAGGCTCTGGCGCGACGCG ATACGACCTTGCTGGGGGTGGTGCTCAACGTGCTATTGGCCTGGCCGGATTGCTGCTTCCGGTCGGAGACCGTGGTGCAT CCGCGCACGCGCAACACCTTGGCGTTTGTCCCGGCTCAGTTCAATGAGTTCGAGATCAGCCCCAAGGAGCGCGAGCTGAT CGACATCTGCAAAGCGGAGAAGGAACAGGGGCGCAAGGTTCTGGCCTACACGGTCTATACCGGAACGCGCGACACCACGT CACGCCTGAAGGGGCTGCTGGAGCAGGAAGGATTCAAGGTGGCGGTACTGCGCGCAAGCGTGGATGCCAGCCGCCGCGAG GACTGGATCGCCGAGCAACTGGACCGGGGCATCGACGTGCTCGTCACCAATCCCGAGCTGGTCAAGACGGGGCTGGACCT GCTGGAGTTCCCGACGATTGTGTTCATGCAAAGTGGCTACAACGTGTACTCGCTCCAACAGGCAGCACGCCGCTCCTGGC GCATTGGGCAGAAACAGCCCGTGCGCGTGATCTACCTCGGCTACGCCGGTTCCTCGCAGATGACCTGCCTGGAACTGATG GCCAAGAAGATCATGGTCTCGCAGTCCACCTCGGGCGATGTGCCCGAATCGGGGCTGGATGTTCTGAACCAGGACGGTGA TTCCGTCGAGGTCGCACTGGCTCGGCAGTTGGTCGCTACCTAA Protein sequence : MLFPFIRGHHHVQPTGQEFFILGRVRMRMGFHWKPVFTQRRTRHGDVAACPDCGTLITDLDGEPVNPVALEAEESRRKCS HCAAPLWTLIRPRSLSGSDQSSVVLKALKRIPTIGEVTAQKLMQKFGDGFLASMLGDNIHEFINLMDGNGELVFSDRQAT RMERAMANMEFGFGEGGYQPSEFIKRYLPQGTFDLLIADEAHEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDL FYLLFRALPGRMIEDGYRPTTSGSMTSAAMAFMRDHGVLKDIYSESAGTAHKTAKGTKVSVRTVKAPGFGPKGVLRCILP FTIFLKLKDIGGNVLPPYDEEFREVQMDVAQAAAYRDLAGRLTAELKQALARRDTTLLGVVLNVLLAWPDCCFRSETVVH PRTRNTLAFVPAQFNEFEISPKERELIDICKAEKEQGRKVLAYTVYTGTRDTTSRLKGLLEQEGFKVAVLRASVDASRRE DWIAEQLDRGIDVLVTNPELVKTGLDLLEFPTIVFMQSGYNVYSLQQAARRSWRIGQKQPVRVIYLGYAGSSQMTCLELM AKKIMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C71 | AAN62165.1 | conserved hypothetical plasmid protein | Not tested | PAGI-2(C) | Protein | 0.0 | 97 |
| ORF SG81 | AAN62302.1 | conserved hypothetical plasmid protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 88 |
| RL063 | AAP84188.1 | plasmid related protein | Not tested | PAPI-1 | Protein | 0.0 | 73 |
| unnamed | ABR13404.1 | putative helicase | Not tested | PAGI-5 | Protein | 0.0 | 73 |
| pph67 | CAI36108.1 | superfamily II DNA/RNA helicase | Not tested | PPHGI-1 | Protein | 0.0 | 73 |
| yea | AAW83099.1 | Yea | Not tested | GGI | Protein | 1e-143 | 51 |
