Gene Information

Name : Daci_4158 (Daci_4158)
Accession : YP_001565174.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4549879 - 4550706 bp
Length : 828 bp
Strand : +
Note : PFAM: protein of unknown function DUF932; KEGG: har:HEAR1987 hypothetical protein

DNA sequence :
ATGTCTCTGGCATCCCGTTTTGCTCCGCAGTCCCCGATCCTGCGCTCAGATCGCCCGCTCTCGGACGACCGCATTCGCGC
CATTGCTCCATCAATCTTCGCCGACGCTCCGCATGGGAGCCGATCCGAGCGGTATGCCTACATACCGACCTCGACCGTGC
TCGCCAAGCTGCGCCAGGAGGGTTTCGAGCCCTTCATGGTGTGCCAGACGCGCGTGCGCAACGAGGATCGGCGCGAGCAC
ACCAAGCATCTCATCCGACTTCGCCATGCCAGCCAGATCAACGGCGACGAGGCGAACGAGATCATCCTGCTCAACAGCCA
CGACGGCACGAGCAGTTACCAGATGCTGGCAGGCATGTTCAGATTCGTCTGCCACAACGGCCTGGTCTGCGGCGATACCA
CCGCCGACATCCGTGTCCCGCACAAGGGGGATGTGGCCAGCCAGGTGATCGAAGGCGCCTACGAAGTCCTTGAAGGCTTC
GAGCGCGTGAAGGACTCGCGCGATGCGATGCGCACCATCACCCTCGATGAGGGCGAAGCAGAAATCTTCGCGCACTCAGC
GCTGGCACTCAAGTACGACGATCCTGCCAAGCCGACGCCTGTCACGGAGCGTCAACTGCTCGCGCCCAGGCGCTGGGACG
ACCGCAGGGATGACCTGTGGGCCGTCTTCAACCGTGTCCAAGAGAACCTCGTCAAGGGGGGCCTGAATGGACGCTCGGCC
AATGGCCGCAATCAGCGCACCCGCCCGGTGCAAGGCATCGACCAGAACCTGCGCCTGAACCGGGCGTTGTGGCTCCTGGC
CGAAGGCATGCGCCAGCTCAAGGCGTGA

Protein sequence :
MSLASRFAPQSPILRSDRPLSDDRIRAIAPSIFADAPHGSRSERYAYIPTSTVLAKLRQEGFEPFMVCQTRVRNEDRREH
TKHLIRLRHASQINGDEANEIILLNSHDGTSSYQMLAGMFRFVCHNGLVCGDTTADIRVPHKGDVASQVIEGAYEVLEGF
ERVKDSRDAMRTITLDEGEAEIFAHSALALKYDDPAKPTPVTERQLLAPRRWDDRRDDLWAVFNRVQENLVKGGLNGRSA
NGRNQRTRPVQGIDQNLRLNRALWLLAEGMRQLKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 8e-111 94
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 7e-98 80
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 6e-64 52
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 7e-64 52
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 1e-65 52
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 7e-64 52
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 1e-62 52
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 3e-63 52
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 1e-62 52
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 3e-63 52
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 1e-62 52
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 3e-63 52
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 7e-64 52
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 9e-62 51
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-62 51
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-62 51
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-62 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_4158 YP_001565174.1 hypothetical protein VFG1615 Protein 8e-63 52
Daci_4158 YP_001565174.1 hypothetical protein VFG1526 Protein 4e-64 52
Daci_4158 YP_001565174.1 hypothetical protein VFG0658 Protein 5e-63 52
Daci_4158 YP_001565174.1 hypothetical protein VFG1676 Protein 5e-62 51