Gene Information

Name : Daci_4149 (Daci_4149)
Accession : YP_001565165.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 4541572 - 4542012 bp
Length : 441 bp
Strand : +
Note : binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA

DNA sequence :
ATGAGCACGCATTTTTGGGGTGAAGGCAACATTGGCTCACCGCCCGAGTACCGGGAGTTCCCCAACGGCAACGACGAGCC
GCGGCGCTTGCTGCGGCTGAACGTGTACTTCGACAACCCCGTTCCCACCAAAGGCGGCGACTTCGAGGATCGCGGCGGTT
TCTGGGCACCGGTGGAAATCTGGCACCGTGACGTCGCACACTGGAAGGATCTGTACCAGAAAGGCATGCGCGTGCTGGTC
GTCGGACGCATGGAGCGCGAACCCTGGACGGACAATGAGGATCAGCCGCGCGAAACCTGGCAGATCAACGCGCGCAGCGT
CGGCATCCTGCCGTTTCGCATCGAGTCCGTGACCCTCAGCCCGAAGCCGCAGGATGCGGAGGCAAAGTCCCAGGCCGCCC
AGGAACCGGCTGCGCCAAAAGAGCCGCGGCGTAGGAAGTGA

Protein sequence :
MSTHFWGEGNIGSPPEYREFPNGNDEPRRLLRLNVYFDNPVPTKGGDFEDRGGFWAPVEIWHRDVAHWKDLYQKGMRVLV
VGRMEREPWTDNEDQPRETWQINARSVGILPFRIESVTLSPKPQDAEAKSQAAQEPAAPKEPRRRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAN62195.1 putative single-stranded DNA binding protein Not tested PAGI-2(C) Protein 1e-51 88
ssb AAN62318.1 putative single-stranded DNA binding protein Not tested PAGI-3(SG) Protein 6e-42 73
ssb CAI36053.1 single-stranded DNA-binding protein Not tested PPHGI-1 Protein 3e-29 56
ssb AAP84220.1 single strand DNA binding protein Not tested PAPI-1 Protein 6e-24 50
unnamed ABR13438.1 single-stranded DNA-binding protein 2 Not tested PAGI-5 Protein 3e-24 50