Gene Information

Name : Daci_3850 (Daci_3850)
Accession : YP_001564866.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 4245030 - 4245572 bp
Length : 543 bp
Strand : +
Note : TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: aav:Aave_1476 uncharacterized conserved protein UCP028301

DNA sequence :

ATGTCGCTCACCAAAACCGGCAAGAGTGGTCAGAAATTCATCGCGCGCAACCGTGCGCCGCGCGTGCAGATCGAGTACGA
CGTCGAGATCTACGGCTCGGAAAAGAAGGTGCAGATCCCCTTCGTGATGGGTGTGCTGGCCGATCTGTCGGGCAAGCCCG
TCGATCCGCTGCCCGAAATCGCCGACCGCAAGTTCCTGGAAATCGACATCGACAACTTCGATGCGCGCATGAAGTCCATC
AAGCCCCGCGTCGCCTTCCAGGTGGACAACACGCTGACGGGCGAGGGCAAGCTCAACATCGACCTGAGCTTCGAGAGCAT
GGAGGACTTCTCCCCCGCCGCCATCGCGCGGCGCGTGGGCGCGCTCAACTCGCTGCTGGAGGCACGCACCCAGCTGCACA
ACCTGCTGTCCTACATGGACGGCAAGCAGGGCGCCGAGGAGCTGATCGGCAAGGTGCTCAAGGACCCTGCGCTGCTCAAG
TCGCTGGCCGCCGCGCCCAACATCACTGCCCCGCAGGCCTCGGGCCCTGCATCCGAGGCTTGA

Protein sequence :

MSLTKTGKSGQKFIARNRAPRVQIEYDVEIYGSEKKVQIPFVMGVLADLSGKPVDPLPEIADRKFLEIDIDNFDARMKSI
KPRVAFQVDNTLTGEGKLNIDLSFESMEDFSPAAIARRVGALNSLLEARTQLHNLLSYMDGKQGAEELIGKVLKDPALLK
SLAAAPNITAPQASGPASEA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0297	NP_454879.1	conserved hypothetical protein	Not tested	SPI-6	Protein	1e-58	68

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Daci_3850	YP_001564866.1	type VI secretion protein	VFG2069	Protein	2e-59	73