Gene Information

Name : Daci_3791 (Daci_3791)
Accession : YP_001564808.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 4170356 - 4171441 bp
Length : 1086 bp
Strand : -
Note : PFAM: transport system permease protein; KEGG: ava:Ava_B0152 transport system permease protein

DNA sequence :
ATGCGGCCAACTGACTCCCGCTGGCCCAGGCGCCCGGGCGCCGCCCGCCTCTGGTGCCTGCTGCTGTTCGCGGCCCTGTT
GCTGGTGATGACGCTGGCCATCACCTGGGGGCCCGTGGACATGCCGGCCGGCACGGTCTGGCGCATTGCCTGGAGCCGGC
TGCTGCAGGTGCTGGGCATGCAGCCGCCGCCGCTGGAGGGCATCACGCCGCAGCACCAGCAGATCGTCTGGCTGATCCGC
ATGCCGCGCGTGCTGCTGGCGGCCCTGGTGGGCGCGGGGCTTGCCGTGGTGGGCACCATCATGCAGGCCATGGTGCGCAA
TCCGCTGGCCGATCCCTATCTGCTGGGCGTGTCCTCTGGTGCGTCGGTGGGTGCCGTGGCCGTGCTGGCCTTCGGTGCGC
TGGCCTCGGCCGGCATGTACGCCCTCACGGCCGGGGCCTTTGTGGGGGCGCTGGCGGCCACCGTCGCCGTCTACCTGCTG
GCGCGCTCCCAGGGCCGCATCCATGCCACGCGGCTGATCCTGGGCGGCGTGGCCATCGGCTATGTGCTGGCGGGCGTGAC
CAGCCTGATCACCCTTTCATCGGGCCAGCGTGACCTAGCCAATGCCCTGCTGACCTGGACGCTGGGCAGCCTGGCCGGCA
CGCAGTGGGAGGAACTGGGCATTCCCGCCGCCGTGCTGGCTGCGGGAATGCTCTGGCTGGGGCTGCAGACGCGCCCGCTC
AACGCCCTTCTGGCCGGTGACGAGGCCGCCGCCACGCTGGGCGTGGACACGGCACGGCTGCGGCGCGCACTGTTCCTGGC
AGTGTCGTTGCTGACGGGCACCATGGTGGCGGTCAGCGGCGCCATCGGCTTTGTGGGGCTGATCGTGCCGCACGCCGCGC
GCATGCTGGTGGGCACGGACCACCGGCGCGTGCTGCCCGTGGCCGCCCTGGCCGGCGCCCTGCTGCTGGTGCTGGTGGAT
CTTGTCGCGCGCACAGCCTTTGCGCCCATGGAACTGCCCGTGGGCGTGATCACCTCGTTGATCGGCGGACCCTTCTTCGT
CTGGATGCTGGTGCGCCAGCCGGTGCAGGGAGGGCGCGGCCCATGA

Protein sequence :
MRPTDSRWPRRPGAARLWCLLLFAALLLVMTLAITWGPVDMPAGTVWRIAWSRLLQVLGMQPPPLEGITPQHQQIVWLIR
MPRVLLAALVGAGLAVVGTIMQAMVRNPLADPYLLGVSSGASVGAVAVLAFGALASAGMYALTAGAFVGALAATVAVYLL
ARSQGRIHATRLILGGVAIGYVLAGVTSLITLSSGQRDLANALLTWTLGSLAGTQWEELGIPAAVLAAGMLWLGLQTRPL
NALLAGDEAAATLGVDTARLRRALFLAVSLLTGTMVAVSGAIGFVGLIVPHAARMLVGTDHRRVLPVAALAGALLLVLVD
LVARTAFAPMELPVGVITSLIGGPFFVWMLVRQPVQGGRGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1928 YP_005686352.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 2e-20 46
Cp1002_1913 YP_005682168.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 6e-21 46
CpC231_1907 YP_005684260.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 6e-21 46
cpfrc_01919 YP_003784319.1 hypothetical protein Not tested PiCp 7 Protein 6e-21 46