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Name : Daci_3682 (Daci_3682) Accession : YP_001564699.1 Strain : Delftia acidovorans SPH-1 Genome accession: NC_010002 Putative virulence/resistance : Unknown Product : NERD domain-containing protein Function : - COG functional category : R : General function prediction only COG ID : COG3972 EC number : - Position : 4045257 - 4047062 bp Length : 1806 bp Strand : + Note : PFAM: NERD domain protein; KEGG: aav:Aave_4619 hypothetical protein DNA sequence : GTGGCGGTACTGATTCCTGCGATGGGGGCGTGCGTTGGGCGCATGACGCCCGGCGAGCGACGGCTGGCCGAGCGTTTGGA GCAAAAGCTCGAAGACGATTACATGCTCTGGTATGACGTACCCATCGGTCCCAAGCAGACGCATCCTGACTTCGTCGTCA TTCATCCACGCAGGGGCGTTCTGATTCTTGAGACCAAGGATTGGCGGCTCGAGACGGTTCAAGAGGCGACCAAACAGGCC TGGACGCTCATCGTGGATGAAAGGCCCAAGGTCGTCATCAATCCGGCAGCTCAGGCGCGACACTGCGCCATTCAAGTGGT CAATGCACTGGAGCGGGATCAGCAACTCATTCACGACGAAGGCCCTCATCAGGGAAAGCTGGCATTTCCCTGGGGCAGCG GCGTGGTGTTCACCAACATCACGCGCAAGCAGTTTGAAGAGTCTGCACTGGACCAGACGATTGATGCGCACCTTGTCATC TGCAAGGACGAGATGCTGGAATCCGTTGATGCAGAGGCTTTCCAGCAGCGCCTGTGGAACATGTTCCCCCACGCTTTCGG CAAAGCCATGTCGGTGCCGCAGCTCGAGCGCACGCGGTGGATCATGTTCCCGCAGGTGCGTGTTCCGGTGCAAGGCAGCC TTCTGCCGGAAGACGCGGACGAGCTGCCGGACATCATGCGCGTCATGGACTTGCAGCAGGAGCAACTCGCGCGCAGCCTG GGCGATGGGCATCGCGTGATCCACGGAGTTGCCGGCTCAGGCAAGACCATGATTCTTGGCTATCGTGCGGAACACTTGGC CAAGACCGCTTCGACCAAGCCCATCCTCGTGCTCTGCTACAACGAGCCCTTGGCAGTGAAGCTCAATGCCTGGTTTGCGG CCAAGGGCCTGGCCGATCGGGTGCACGCCCGCAACTTCCACAAGTGGTGTCGCCAGCAGTTGGTGGCCTATGGTCAGACG CTACCCGCTCAGGGCCCGGGCATGTTTGATCAGATGGTGGAGTTTGTAATTCGCGGCGTGGACCGGCAACAGATTCCGTC CGGGCAGTACCAGGCCGTGATGGTCGACGAGGGGCACGACTTTCAGCCTGAATGGCTCAAGCTCGTCACCCAGATGGTGG ACCCCGAGACCAACAGCCTGTTGATCCTGTACGACAGCGCCCAGAACATCTATGGCAAGAGCAAGGCGCGTGGGTTCAGC TTCAAGAGCGTGGGAATCCAGGCCTCTGGGCGCACAACCATTCTCAAGATCAACTACCGCAACACCAGGCAGATTCTGCA AATCGCCAACCGCGTCGCCGCCGAGTTCCTGCAACCCAATGCCCAGGATGATGACGGTGTTCCGCTGGTGCAACCCATCA GCTGCGGCCGCGAAGGGCAGGAGCCGCTGATCGTGCGCCTGCCGAGCTTGCGGGACGAGCCCGCCAAGATCGCCGAGCTG CTGGCTGCTGCGCATCAGGAAGGCCACGCCTGGGGTGACATGGCCATCCTGTGCCGCGATCACGACTCCATGAACCAGTG CGCCCTGGCACTTGGCCGCCGAAAACTGCCGCATCGCGTGCGACATCGGTCAGGTGACTTCGATCCACTGGCCGACACCA TCAAAGTGATGACAATGCACGCCAGCAAGGGGTTGGAGTTCCCGGTCGTGGCCGTCGCAGGAGTGGGGCAGATGCCGCGT GAAGGCGAAGATGCGGCGGACGAGGCCAAACTGTTCTATGTGGCTGCGACTCGGGCGACACAAAAACTGGTGTTGACTGT GGCGGGAGAAGGGGCGTTTGCGAAGGCGCTGGTGGATGCGGGGTGA Protein sequence : MAVLIPAMGACVGRMTPGERRLAERLEQKLEDDYMLWYDVPIGPKQTHPDFVVIHPRRGVLILETKDWRLETVQEATKQA WTLIVDERPKVVINPAAQARHCAIQVVNALERDQQLIHDEGPHQGKLAFPWGSGVVFTNITRKQFEESALDQTIDAHLVI CKDEMLESVDAEAFQQRLWNMFPHAFGKAMSVPQLERTRWIMFPQVRVPVQGSLLPEDADELPDIMRVMDLQQEQLARSL GDGHRVIHGVAGSGKTMILGYRAEHLAKTASTKPILVLCYNEPLAVKLNAWFAAKGLADRVHARNFHKWCRQQLVAYGQT LPAQGPGMFDQMVEFVIRGVDRQQIPSGQYQAVMVDEGHDFQPEWLKLVTQMVDPETNSLLILYDSAQNIYGKSKARGFS FKSVGIQASGRTTILKINYRNTRQILQIANRVAAEFLQPNAQDDDGVPLVQPISCGREGQEPLIVRLPSLRDEPAKIAEL LAAAHQEGHAWGDMAILCRDHDSMNQCALALGRRKLPHRVRHRSGDFDPLADTIKVMTMHASKGLEFPVVAVAGVGQMPR EGEDAADEAKLFYVAATRATQKLVLTVAGEGAFAKALVDAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| S12 | AAQ19135.1 | putative UvrD/REP helicase | Not tested | PAI I CL3 | Protein | 7e-102 | 41 |
| uvrD | ADD91733.1 | putative uvrD/REP helicase | Not tested | PAI-I AL862 | Protein | 3e-101 | 41 |
