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Name : Daci_3582 (Daci_3582) Accession : YP_001564601.1 Strain : Delftia acidovorans SPH-1 Genome accession: NC_010002 Putative virulence/resistance : Unknown Product : Fis family proprionate catabolism activator Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 3928928 - 3930973 bp Length : 2046 bp Strand : + Note : KEGG: reh:H16_A1904 propionate catabolism activator; TIGRFAM: PAS sensor protein; propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; Propionate catabolism activator DNA sequence : ATGAATGAAATAATCGGTTGCATGAATGAATCAGTCGTGCCCCCTGTCCCTGGAACCCCGTCCGGCCCCCGCGCGGCATG GCCCCGTGTCGTCACCATAGGCCGCCACCGCATCGGCCGCGTGCTGGAGCGCATGTCCCTGGCGGTGGGCGACCAGGTGC GTGTGGAGCATGTCAGCGCGGCCTTTGACGACGCCGTGCAGGCCGTGCGTGCGCTGCAGGCGGTCGAGCCCATAGACGCC CTGGTGGCCGCCGGCGCCAGTGGTGCCTGGGTGCGCGAGCATGTCGACATTCCCGTGGTCATGATCGAGGTGCGCGGCTT CGATCTGCTGCAGGCGCTGGCCAGCGCGCGGGAATTGGCGCAGGCGGGCGGCACGCCGCGCATCGGGCTGGTGTCGTTTG ACCATCCCTCGCCTCACCTGGCCCAGTTCGACGCGCTGTTCGGCGCCGGCATTGCCCAGTTCAGCTACCACGGGCCCGAG GATGCCCAGGCCTGCGTGCGTGCGCTGCAGGCCGCAGGCGTGGGTGCCGTGGTCGCGCCAGGTCTGGTTGCCGACCTGGC CGAGCAGGCCGGCATTCCCAGCGTGCTGCTGTACTCCGACGGCGCCGTGCTGCAGGCCCTGCGCGACGCGGTGCTGCTGG CCCGCCACCGCCATGCCGAGCGTGCCCGCCACCAGCGGCTGGAAACCGTGCTTGGCCAGTTGCAGGACGGCGTGGTCGCC GTGGATACGCAAGGCTGCATCCAGGCACTGAACCCCACCATGGCAGCCCTGCTGGGAGCGCCCGCCAGGGCGCTGCATGG CCGGCTGCTGGACGAGGTGGCGCCCGCGCTGGCGCTGGCACAGGCGCTGCAGTCGCAGTCCCTGGAGCCCGAAGGCAGTG AAGACGTGGTCCAGCTGGCCATGCGCACCCTGGTGGTACGGCGCGCACCCATCGTGGAAAACGGCCAGCTCACGGGCGCC TTGCTGGTCTGCCGCGACCCCGCCACCATCCAGCGCGCCGACCGCCACCTGCGCGCCAACCGCAGCCTGCGCGGCGCGGG CGTGCGCTGGCGCATCGAAGACTACGCGGGCGACAGTGAACCCGCCCAGCGCGTGCGCCGCCTGGCGCGCCAGTTCGCGG CCAGCGATGCCACCGTGCTCATCCAGGGCGACAGTGGCACGGGCAAGGAGCTGCTGGCACAGGGCATGCACCGCGCCAGC CGGCGCGCCGCCCAGCCCTTTCTGGCCGTCAACTGCGCGGCCCTGGGGGAAAGCCTGCTGGAGAGCGAACTCTTCGGCTA CGACGAAGGCGCTTTCACCGGCGCGCGGCGCGGCGGCAAGACCGGGCTGATCGAGGCGGCCCATACGGGCACCTTGTTCC TGGACGAGATCGGGGACATGCCGCTGGCCCTGCAGTCCCGCCTGCTGCGCGTGCTGCAGGAGCGCGAAGTGCTGCGCGTG GGCTCCACCACGTCCGTGCCCGTGGACCTGCGCGTCATCGCCGCCACGCATGCCGATCTGGCGGCCCTGGTCGAGCGCGG TGAATTCAGGCGCGACCTGTTCTACCGCCTGGCCGTGCTGCGCCTGGCCATGCCCGGACTGCACGAACGCGGACAGGGCG ATGTCCAGGCCCTGGCCCGCACCATGCTTGCGCGGCGTTTGCGCACGCAGTCACTGCAGGCCGAGTCCTCTTCACTGGAG CCCTTGCTGGAAGCCCTGCTGGATTTGGCCGCCGCGCACCGCTGGCCCGGCAATGCGCGAGAGCTGGACAACTGGGTGGA ACGCCTGCTGGCCTGCCGCCACGACCTGCGTGACGGCGCGGGCCGCGTGGACATGGGCCGGTTGCGGGAGCTGTTTCCTG AATGCGACGGGGCTGGGCAGGGTACCGTTCAGGCCCTGCCAGCGCAGCAGCGGCAACTGCAACTGCGCGAGGCCCGTCGC GATGCCGAGCGCCAGCGCATGCGCGAAGTACTGGAGCAGGTGCAGGGCGACCAGCGCCGCGCCTGCGAGATCCTGGGCAT CAGCCGGGCCACGCTGTGGCGCAGGTTGCGTAGCCAAAACGACTGA Protein sequence : MNEIIGCMNESVVPPVPGTPSGPRAAWPRVVTIGRHRIGRVLERMSLAVGDQVRVEHVSAAFDDAVQAVRALQAVEPIDA LVAAGASGAWVREHVDIPVVMIEVRGFDLLQALASARELAQAGGTPRIGLVSFDHPSPHLAQFDALFGAGIAQFSYHGPE DAQACVRALQAAGVGAVVAPGLVADLAEQAGIPSVLLYSDGAVLQALRDAVLLARHRHAERARHQRLETVLGQLQDGVVA VDTQGCIQALNPTMAALLGAPARALHGRLLDEVAPALALAQALQSQSLEPEGSEDVVQLAMRTLVVRRAPIVENGQLTGA LLVCRDPATIQRADRHLRANRSLRGAGVRWRIEDYAGDSEPAQRVRRLARQFAASDATVLIQGDSGTGKELLAQGMHRAS RRAAQPFLAVNCAALGESLLESELFGYDEGAFTGARRGGKTGLIEAAHTGTLFLDEIGDMPLALQSRLLRVLQEREVLRV GSTTSVPVDLRVIAATHADLAALVERGEFRRDLFYRLAVLRLAMPGLHERGQGDVQALARTMLARRLRTQSLQAESSSLE PLLEALLDLAAAHRWPGNARELDNWVERLLACRHDLRDGAGRVDMGRLRELFPECDGAGQGTVQALPAQQRQLQLREARR DAERQRMREVLEQVQGDQRRACEILGISRATLWRRLRSQND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 7e-72 | 42 |
