Gene Information

Name : Daci_3350 (Daci_3350)
Accession : YP_001564373.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 3676230 - 3677738 bp
Length : 1509 bp
Strand : -
Note : PFAM: Aldehyde Dehydrogenase_; KEGG: azo:azo2250 probable succinate semialdehyde dehydrogenase [NAD(P)+]

DNA sequence : 
ATGAACCTCAGCGACATCCAGCACCAGATCACCGAGCGCGCCAGCGCCTTCCTCAACCGGGGCACGCATGACCTCTTCAT
CGACGGCCAATGGGTGGCGGCCCGGACCGGCCAGCGCCTGTCAACCGTCAACCCGGCCACCGAGGCCGTGATCGCCGAAG
TCGCCAGCGCCGGCCCGGCCGACGTGGACTTGGCCGTGCGCGCCGCGCACCGCGCCCTGCACCTGGGCCCCTGGGGCCGC
ATGCGCCCCGTGGAGCGCGAGCGCCTGATGCTGCGCCTGGCCGACCTCATGGAGACCCATGCCCAGGCCCTGGCCGAGGT
CGAATCGCTGGACAACGGCAAGTCCGCCGCCATTGCGCGCGCCGTGGACATCGCGATGGCCATCGACTCCATCCGCTACA
TGGCCGGCTGGGCCACCAAGATCGAAGGCATGACGCACGAGCACTCCGTGCCCTTCGCGCCCGAGGCCCAGATGTTCACC
TACACCCGGCGCGAGCCCGTGGGCGTGGTCGCCGCCGTCGTGCCCTGGAACTTCCCCCTGCTCATGGCCACCTGGAAGCT
GGCGCCCGCGCTGGCTGCCGGCTGCACCCTGGTGCTCAAGCCCGCCGAGCAGACGCCGCTGACCGCGCTGATGCTGGCCG
AGCTGATCCAGGAAGCGGGCTTTCCGCCCGGCGTGTTCAACGTGGTCACGGGCGACGGCCCCGGCACGGGTGCGCCCCTG
GTCTCGCACCCGCTGGTCAACAAGGTCAGCTTCACGGGCTCGACCGAGGTGGGCAAGCTCATCGGCCATGCCTGCATGGA
CAACATGACGCGCATCACGCTGGAGCTGGGCGGCAAGTCCCCCGTCATCGTGCTGGACGACTGCGATCCCGCCACGGCGG
CGGCGGGTGCGGCCAATGCCATCTTCTTCAACCACGGCCAGGTCTGCTGCGCGGGCTCGCGCCTGTACGTGCACAAGAGC
ATGTTCGACCGCGTGGTGGCCGACGTGGCCGACCAGGCCGCCCGGCTTACCCTGGGCCATGGCCTGGACCCCAGCGCGCA
GATGGGCCCGCTGGTCTCGCAGGAACAGATGGAGCGCGTCTGCAGCTACATCGACATAGGCCGCAGCCAGGGCGCCGAGG
TGGTGACGGGCGGCGCCCGCGCAGGCCAGCGCGGCTACTTCGTGCAGCCCACGGTGATGACCGGCGTGCAGCACGACCAC
CGCGTGGCACGCGAGGAAATCTTCGGCCCCGTGCTCGTGGCCATGCCCTATGACGACCTCGACGAAGTCGCCGCCTGGGC
CAACGACACGCCCTACGGCCTGGGCGCCAGCATCTGGTCCAACAACCTGTCCAAGGTCCACCGGCTGATCCCCAAGATCC
AGTCCGGCACGGTCTGGGTCAACTGCCACAGCACCCTGGACCCGGGCATGCCCTTCGGCGGCTACAAGCAGTCCGGCATG
GGCCGCGATATGGGCCGCACCGCGCTGGATGCCTACCTGGAGACCAAGTCGGTGTTCATCAATCTGTGA

Protein sequence : 
MNLSDIQHQITERASAFLNRGTHDLFIDGQWVAARTGQRLSTVNPATEAVIAEVASAGPADVDLAVRAAHRALHLGPWGR
MRPVERERLMLRLADLMETHAQALAEVESLDNGKSAAIARAVDIAMAIDSIRYMAGWATKIEGMTHEHSVPFAPEAQMFT
YTRREPVGVVAAVVPWNFPLLMATWKLAPALAAGCTLVLKPAEQTPLTALMLAELIQEAGFPPGVFNVVTGDGPGTGAPL
VSHPLVNKVSFTGSTEVGKLIGHACMDNMTRITLELGGKSPVIVLDDCDPATAAAGAANAIFFNHGQVCCAGSRLYVHKS
MFDRVVADVADQAARLTLGHGLDPSAQMGPLVSQEQMERVCSYIDIGRSQGAEVVTGGARAGQRGYFVQPTVMTGVQHDH
RVAREEIFGPVLVAMPYDDLDEVAAWANDTPYGLGASIWSNNLSKVHRLIPKIQSGTVWVNCHSTLDPGMPFGGYKQSGM
GRDMGRTALDAYLETKSVFINL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-72 44
aldA ACK75574.1 aldehyde dehydrogenase Not tested VPI Protein 3e-46 42
aldA ACK75590.1 aldehyde dehydrogenase Not tested VPI Protein 3e-46 42
aldA ACK75596.1 aldehyde dehydrogenase Not tested VPI Protein 3e-46 42
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-72 42
aldA ACK75580.1 aldehyde dehydrogenase Not tested VPI Protein 7e-46 41
aldA ACK75593.1 aldehyde dehydrogenase Not tested VPI Protein 3e-45 41
aldA ACK75577.1 aldehyde dehydrogenase Not tested VPI Protein 8e-46 41
aldA ACK75588.1 aldehyde dehydrogenase Not tested VPI Protein 7e-46 41
aldA ACK75585.1 aldehyde dehydrogenase Not tested VPI Protein 3e-45 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-76 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-76 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-76 41
aldA ACK75582.1 aldehyde dehydrogenase Not tested VPI Protein 9e-46 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-76 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_3350 YP_001564373.1 aldehyde dehydrogenase VFG0082 Protein 7e-73 42