Gene Information

Name : Daci_3149 (Daci_3149)
Accession : YP_001564172.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3466331 - 3467146 bp
Length : 816 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_3622 ferric enterobactin transport protein FepC PA4158

DNA sequence : 
ATGACGCAGCGCCTGAGTGCTGATGCGGTGACGCTGCGCTACGGCGAGCGCACGATTTCGCAGGGCCTGTCCCTTGCCAT
TCCCGATGGTTCCTTCACCGTCATCGTGGGGCCGAACGCCTGCGGCAAGTCCACCCTGCTGCGCGCGCTGTCGCGGCTGC
TGGTGCCGGCTGCCGGGCAGGTCATCCTGGATGGCCGGCACATCTCGCAATTTCCCGCCAAGGAGGTGGCGCGGCGCCTG
GGCCTGCTGCCGCAAAGCGCGGTGGCGCCCGAGGGCATCACGGTGGCGGACCTGGTGGCGCGGGGGCGCTACCCCCATCA
ATCCTTCCTGAGGCAGTGGACGGACGCGGATGAGCAGGCCGTGGCCGAGGCCATGCAGGCCACCGATGTGGCAGCGCTGT
CAGACCGCCTGCTGGACGAGCTGTCAGGCGGCCAGCGCCAGCGGGTGTGGATTGCGATGGTGCTGGCGCAGCAGACGCCG
ATCCTGCTGCTGGACGAGCCCACGACGTTCCTGGACATCGCCCACCAGATCGAGCTGATGGAGCTGCTGGCGGATCTCAA
CGATGCCCGCCGCACGGTGGTTGCGGTGCTGCACGACCTCAACCAGGCGTGCCGCTATGCCTCGCACCTGATCGCCATGC
GCGACGGGCGCATTGCCGCGCAGGGCGCGCCCGGAGCGATCTTCACGGAGCAGTTGGTGCAGGAGGTGTTCGGCCTGCCG
GCCGTGATCATTGCGGACCCCGTGTCGGGGACGCCGCTGGTGGTGCCCAGGGGGCGCAGGGCCGTGAATGCCATGGAGCG
CGCCGCAGGGAACTGA

Protein sequence : 
MTQRLSADAVTLRYGERTISQGLSLAIPDGSFTVIVGPNACGKSTLLRALSRLLVPAAGQVILDGRHISQFPAKEVARRL
GLLPQSAVAPEGITVADLVARGRYPHQSFLRQWTDADEQAVAEAMQATDVAALSDRLLDELSGGQRQRVWIAMVLAQQTP
ILLLDEPTTFLDIAHQIELMELLADLNDARRTVVAVLHDLNQACRYASHLIAMRDGRIAAQGAPGAIFTEQLVQEVFGLP
AVIIADPVSGTPLVVPRGRRAVNAMERAAGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-67 55
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-66 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-66 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-66 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-66 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-57 48
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-64 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-64 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-53 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 42
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-38 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_3149 YP_001564172.1 ABC transporter-like protein BAC0164 Protein 1e-57 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_3149 YP_001564172.1 ABC transporter-like protein VFG0925 Protein 7e-82 62
Daci_3149 YP_001564172.1 ABC transporter-like protein VFG1042 Protein 1e-57 48