|
Name : Daci_3081 (Daci_3081) Accession : YP_001564104.1 Strain : Delftia acidovorans SPH-1 Genome accession: NC_010002 Putative virulence/resistance : Unknown Product : two component LuxR family transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2197 EC number : - Position : 3399091 - 3399744 bp Length : 654 bp Strand : + Note : PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mms:mma_0618 positive response regulator for colanic capsule biosynthesis DNA sequence : ATGAAACTGAAACTGCGCATTGCTGTCGTGGACGACCACGCCGTGGTCCTGCTTGGCGTCAAGGACTTCCTGGAGCAGGA CCCCAATCTCCAGGTCGTGGCCACGTTCAGCACGCCATCGTCCTTGATGCAATACGCCAGATCGAACCCGCTGGACGTGG TTCTGACCGACTACTCCATGCCGGGCGACGATGTCTATGGCGATGGCCTGCGCTACGTGGACTATCTGATACGCCACTTC CCGGACATCAAGGTGCTGGTGCTGACGACCGTCTCCAACCCCATGATCATCTCGGCCCTGTATGACGCCGGCGTCGCCGG TGTGCTGCTCAAGGAAGACCCGCTCACCCAGATCATGGCGGCGCTGCAGTGTGTCCGCCTCAATGCCCGCTACTATTCGC CCTCATTCCAGGCCGACACGCCCAGGCAGGAGCGGTCCGTTTTCCTGGCCGAGCGCGCCAACAGCCTCTCGCCGCGCGAG TTCGAAGTCCTCAGGCATTTCGCCAATGGTGAGTCCATCACCGAAATCGCCGCACGCCTGCGGCGCAGCGTCAAGACCGT CAGCCTCCAGAAGAACTCCGCCATGCGCAAGCTGAACGTGGACAGCAACCAGGACCTGGCGGCCTTCTGCGCCGAGCACC ATCTTTTCGACTGA Protein sequence : MKLKLRIAVVDDHAVVLLGVKDFLEQDPNLQVVATFSTPSSLMQYARSNPLDVVLTDYSMPGDDVYGDGLRYVDYLIRHF PDIKVLVLTTVSNPMIISALYDAGVAGVLLKEDPLTQIMAALQCVRLNARYYSPSFQADTPRQERSVFLAERANSLSPRE FEVLRHFANGESITEIAARLRRSVKTVSLQKNSAMRKLNVDSNQDLAAFCAEHHLFD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rcsB | AAP84166.1 | RcsB | Not tested | PAPI-1 | Protein | 4e-42 | 48 |
