Gene Information

Name : Daci_2714 (Daci_2714)
Accession : YP_001563737.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2984405 - 2985070 bp
Length : 666 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rme:Rmet_3016 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGCGTATTGATCGTGGAAGACTCGCAAACGCTGGCCGAAGCCCTGAGCCAGAGCCTTCAGTCGGAAGGCTATGCCTG
CGATACAGCAGCCGATGGCGTGTCCGCGCTGAAGTTTCTTGCCAGCTACCGGTACGACGCCATCATTCTGGACTTGATGC
TGCCCCGGCTGGACGGCTTTGGCGTGTTGCGCGCATTGAGCCGGGAGGCCCATGCCGCACCGGTATTGGTGCTCTCCGCG
CGCGAACTGCTTGACGACCGGGTGCGGGCCTTGGATGCGGGTGCCGATGACTACCTGACAAAACCCTTCGAGCTGGCCGA
ACTGCTGGCTCGCCTGCGGGCGCTGGTGCGGCGTCCGCCGCAACGGGACGTTCCAGTTCTGCGCCACGGCGATCTGGAGG
TCGATCCGCGCTCGCGCACCGCGAGGTTCAAGGGCATTGATCTTGGGCTCACGCCGAAGGAATATGGACTGCTCGACTTG
CTGCTGCGTCGGCGCGGCGCCACGCTGTCGCGCCCGCAGATTTTTGAACATTTGTACGACAGCCGCAGCGATGCATCGGA
CAAGGTGGTGGAGGTGATCGTCAGCACCTTGCGAACCAAGCTCGCCCAGTGCGGCCTGGATGAACTGATCGTGACACGAC
GTGGCTTCGGCTACATACTGCCCTGA

Protein sequence : 
MRVLIVEDSQTLAEALSQSLQSEGYACDTAADGVSALKFLASYRYDAIILDLMLPRLDGFGVLRALSREAHAAPVLVLSA
RELLDDRVRALDAGADDYLTKPFELAELLARLRALVRRPPQRDVPVLRHGDLEVDPRSRTARFKGIDLGLTPKEYGLLDL
LLRRRGATLSRPQIFEHLYDSRSDASDKVVEVIVSTLRTKLAQCGLDELIVTRRGFGYILP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-24 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_2714 YP_001563737.1 two component transcriptional regulator BAC0197 Protein 1e-27 44
Daci_2714 YP_001563737.1 two component transcriptional regulator BAC0125 Protein 5e-26 43
Daci_2714 YP_001563737.1 two component transcriptional regulator BAC0083 Protein 1e-23 43
Daci_2714 YP_001563737.1 two component transcriptional regulator BAC0308 Protein 4e-23 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_2714 YP_001563737.1 two component transcriptional regulator VFG1390 Protein 2e-25 44
Daci_2714 YP_001563737.1 two component transcriptional regulator VFG0596 Protein 5e-25 42
Daci_2714 YP_001563737.1 two component transcriptional regulator VFG1389 Protein 5e-23 42
Daci_2714 YP_001563737.1 two component transcriptional regulator VFG0473 Protein 3e-28 41
Daci_2714 YP_001563737.1 two component transcriptional regulator VFG1386 Protein 2e-23 41