Gene Information

Name : Daci_2679 (Daci_2679)
Accession : YP_001563702.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Unknown
Product : transposase Tn3 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4644
EC number : -
Position : 2948215 - 2951187 bp
Length : 2973 bp
Strand : -
Note : PFAM: transposase Tn3 family protein; KEGG: ppd:Ppro_3845 transposase Tn3 family protein

DNA sequence :
ATGCCACGCCGCTCAATCCTGTCCGCCACCGAGCGCGAAAGTCTGCTGGCACTGCCAGATGCCAAAGACGAACTGATACG
GCACTACACGTTCAACGAAACCGACCTGTCGGTGATCCGTCAGCGTCGCGGCGCCGCGAATCGATTGGGCTTCGCCGTGC
AGCTTTGCTACTTGCGATTCCCTGGCATCTTCTTGGGCGTCGATGAACCTCCATTTCCGCCCCTGCTGCGCATGGTGGCC
GCACAACTCAAGGTGCCGGTGGAAAGCTGGAACGATTACGGCCAGCGCGAGCAGACACGGCGGGAGCACTTGGTCGAGCT
GCAAACGGTGTTTGGATTCAAGCCCTTCACCATGAGTCACTACCGGCAAGCCGTGCATACACTGACCGAACTGGCCTTGC
AAACAGACAAAGGCATTGTGCTGGCCAGCACCCTTGTTGAAAACCTGCGGCGGCAGAGCATCATCCTACCCGCCATGAAT
GCCATCGAGCGCGCAAGCGCCGAGGCCATTACCCGTGCCAACCGGAGCATCCATGCGGCATTGGCCGATTCCTTGATACC
TGTCCATCGCCAGCGCCTGGACGAACTGCTCAAGCGCAAGGATGGTAGCAAAATGACGTGGCTAGCGTGGCTGCGCCAAT
CGCCCGCCAAGCCGAACTCGCGCCACATGCTTGAACACATCGAACGCCTCAAAGCCTGGCAGGCGCTTGACCTACCTGCT
GGCATCGAACGGCAGGTACACCAAAACCGCTTGCTCAAGATCGCCCGCGAGGGCGGCCAGATGACGCCCGCCGACCTGGC
CAAGTTCGAGTCGCAGCGGCGTTACGCCACCTTGGTAGCACTGGCCATCGAGGGCATGGCCACCGTCACTGATGAAATCA
TCGACCTTCACGACCGCATCATCGGCAAGCTGTTCAATGCGGCCAAGAACAAGCATCAACAGCAGTTCCAGGCTTCCGGC
AAGGCGATCAACGACAAGGTGCGGATGTATGGGCGCATCGGTCAGGCGCTGATTGAAGCCAAACAAAGCGGCGGCGATCC
GTTCGCCGCCATCGAAGCGGTCATGCCGTGGGACACCTTCGCCGCCAACGTCACCGAGGCGCAAACGCTGGCGCGGCCTG
CCGATTTTGATTTCCTGCACCATATCGGCGAGAGTTACGCCACGCTGCGCCGCTATGCGCCGCAGTTCCTGGACGTGCTC
AAACTGCGCGCCGCGCCCACCGCCAAGGGTGTGCTCGATGCCATCGACGTGCTGCGCGGCATGAACAGCGACAGCGCGCG
CAAGGTGCCCGCCGATGCGCCAACCGCATTCATCAAGCCGCGCTGGGCAAAGCTGGTTCTGACCGACGAGGGTATTGACC
GGCGTTACTACGAGTTATGCGCCCTGTCGGAGCTGAAGAACGCACTGCGCTCTGGTGATGTTTGGGTGCAGGGTTCGCGC
CAGTTCAAGGACTTCGACGAATACCTGGTGCCGATCGAGAAGTTCGCCACCCTGAAGCTGGCCAGCGAATTGCCACTGGC
CGTGGCCACCGACTGCGACCAATATCTGCATGACCGACTGGAATTATTGGAGGCGCAACTCGCCACAGTCAACCGCATGG
CGGCGACCAACGACTTACCGGATGCCATCATCACCACTGCATCGGGCCTGAAGATCACGCCGCTGGACGCAGCGGTGCCA
GACGCCGCGCAAGCCTTGATTGACCAGTCGGCGATGTTGCTGCCGCACCTCAAGATCACCGAGTTGCTGATGGAGGTCGA
TGAATGGACGGGCTTCACGCGCCACTTCACACACCTGAAGACCGGCGACACGGCCAAGGACAAAACCTTGCTGATGACGA
CGATTCTGGCTGATGGTATCAATCTTGGGCTCACCAAGATGGCCGAGTCCTGCCCTGGCACCACCTACGCCAAGCTGTCT
TGGCTGCAAGCCTGGCACGTTCGCGACGAAACCTATTCGACGGCGCTGGCCGAGCTGGTGAACGCACAGTTTCGACAACC
CTTCGCCGGAAACTGGGGCGACGGCACCACGTCATCGTCGGACGGCCAGAACTTCCGAACCGGCAGCAAGGCAGAGAGCA
CCGGGCATATCAATCCGAAGTATGGAAGTAGCCCTGGGCGGACGTTCTATACCCATATCTCCGACCAATACGCGCCCTTC
AGCGCCAAGGTGGTCAACGTCGGCTTGCGCGACTCGACCTATGTGCTCGATGGCCTGCTGTACCACGAGTCTGACTTGCG
TATCGAGGAACACTACACCGACACGGCGGGCTTCACCGATCATGTGTTCGGCCTGATGCACTTTCTGGGATTCCGGTTCG
CGCCGCGCATCCGCGACCTGGGCGACACCAAGCTGTTCATTCCCAAGGGCGATACTGCCTACGATGCACTCAAGCCGATG
ATTAGCAGCGACAGGCTGAACATCAAGGCTATTCGCGCTCATTGGGATGAAATCCTACGGCTGGCCACTTCGATCAAGCA
GGGCACGGTGACGGCCTCGCTGATGCTGCGCAAGCTCGGCAGCTATCCGCGCCAAAACGGCTTGGCCGTCGCCCTGCGCG
AGCTGGGGCGCATCGAGCGCACGCTGTTCACTCTGGATTGGCTGCAAAGCGTGGAGCTGCGCCGCCGCGTCCATGCGGGG
CTGAATAAGGGCGAGGCGCGCAACGCGCTGGCCAGGGCGGTCTTCTTCTACCGATTGGGTGAAATCCGCGACCGCAGTTT
TGAGCAGCAGCGCTACCGGGCCAGCGGCCTCAATCTGGTGACGGCGGCCATCGTGTTGTGGAACACGGTCTATCTGGAGC
GTGCCACCAGTGCTTTGCGTGCCCACGGCAAGGCGCTGGACGACACGTTGCTGCAATATCTGTCACCGCTGGGGTGGGAG
CATATCAACCTGACCGGCGATTACCTATGGCGCAGCAGTGCCAAGGTCGGTGCGGGGAAGTTCAGGCCATTGCGACCGCT
GCCACCGGCTTAG

Protein sequence :
MPRRSILSATERESLLALPDAKDELIRHYTFNETDLSVIRQRRGAANRLGFAVQLCYLRFPGIFLGVDEPPFPPLLRMVA
AQLKVPVESWNDYGQREQTRREHLVELQTVFGFKPFTMSHYRQAVHTLTELALQTDKGIVLASTLVENLRRQSIILPAMN
AIERASAEAITRANRSIHAALADSLIPVHRQRLDELLKRKDGSKMTWLAWLRQSPAKPNSRHMLEHIERLKAWQALDLPA
GIERQVHQNRLLKIAREGGQMTPADLAKFESQRRYATLVALAIEGMATVTDEIIDLHDRIIGKLFNAAKNKHQQQFQASG
KAINDKVRMYGRIGQALIEAKQSGGDPFAAIEAVMPWDTFAANVTEAQTLARPADFDFLHHIGESYATLRRYAPQFLDVL
KLRAAPTAKGVLDAIDVLRGMNSDSARKVPADAPTAFIKPRWAKLVLTDEGIDRRYYELCALSELKNALRSGDVWVQGSR
QFKDFDEYLVPIEKFATLKLASELPLAVATDCDQYLHDRLELLEAQLATVNRMAATNDLPDAIITTASGLKITPLDAAVP
DAAQALIDQSAMLLPHLKITELLMEVDEWTGFTRHFTHLKTGDTAKDKTLLMTTILADGINLGLTKMAESCPGTTYAKLS
WLQAWHVRDETYSTALAELVNAQFRQPFAGNWGDGTTSSSDGQNFRTGSKAESTGHINPKYGSSPGRTFYTHISDQYAPF
SAKVVNVGLRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFGLMHFLGFRFAPRIRDLGDTKLFIPKGDTAYDALKPM
ISSDRLNIKAIRAHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFTLDWLQSVELRRRVHAG
LNKGEARNALARAVFFYRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERATSALRAHGKALDDTLLQYLSPLGWE
HINLTGDYLWRSSAKVGAGKFRPLRPLPPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA ACF06153.1 transposase Not tested Tn5036-like Protein 0.0 97
EC042_4089 YP_006098372.1 transposase Not tested Tn2411 Protein 0.0 88
tnpA AAL08440.1 transposase TnpA Not tested SRL Protein 0.0 86
EXA24 ABD94633.1 truncated Tn1721 tranposase Not tested ExoU island A Protein 0.0 72
tnpA ACY75538.1 TnpA Not tested Tn6060 Protein 0.0 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_2679 YP_001563702.1 transposase Tn3 family protein VFG1031 Protein 0.0 86