Gene Information

Name : Daci_2541 (Daci_2541)
Accession : YP_001563564.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2814616 - 2814921 bp
Length : 306 bp
Strand : +
Note : PFAM: transposase IS3/IS911 family protein; KEGG: ecw:EcE24377A_F0075 IS2, transposase orfA

DNA sequence :
GTGCGTCGAACCTACGAACCAGGCATGAGCGTGTCATTGGTCGCTCGGCAGGAAGACGTTTCGGCTGGACTGCTGTTTCA
GTGGCGCAAGCTCGAACGCCAAGGTGCTTTGACCGCCGTCTCCGCTGGCGAGGCAGTCGTGCCGGCATCCGAACTGGCGG
CTGCACGCGCGGAAATCGCCAAGCTGCAGCGCGTGCTCGGCAAGAAGACCTTGGAGAACGAAATCCTCAAGGAAGCCGTG
GAGTACGCCGCAGAAAAATTGCCGACTTGCCCAGCTATGGCTACCGACGTGCCTGTGCCTTGGTGA

Protein sequence :
MRRTYEPGMSVSLVARQEDVSAGLLFQWRKLERQGALTAVSAGEAVVPASELAAARAEIAKLQRVLGKKTLENEILKEAV
EYAAEKLPTCPAMATDVPVPW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 2e-15 66
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 2e-15 66
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 2e-15 66
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 2e-15 66
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 2e-15 66
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 2e-15 66
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 7e-15 64
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 1e-15 60
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 2e-15 60
insC YP_854262.1 IS2 transposase Not tested PAI I APEC-O1 Protein 1e-12 59
c5196 NP_757044.1 transposase insC Not tested PAI II CFT073 Protein 1e-12 59
insC AAZ04431.1 IS2 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 9e-13 59
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 6e-15 59
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 6e-15 59
unnamed AAL67376.1 insertion sequence protein Not tested PAI II CFT073 Protein 5e-10 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_2541 YP_001563564.1 transposase IS3/IS911 family protein VFG0648 Protein 6e-16 60
Daci_2541 YP_001563564.1 transposase IS3/IS911 family protein VFG0622 Protein 2e-15 59
Daci_2541 YP_001563564.1 transposase IS3/IS911 family protein VFG0609 Protein 2e-15 59