Gene Information

Name : Daci_2332 (Daci_2332)
Accession : YP_001563355.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Resistance
Product : beta-lactamase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2602
EC number : 3.5.2.6
Position : 2571131 - 2571931 bp
Length : 801 bp
Strand : +
Note : PFAM: penicillin-binding protein transpeptidase; KEGG: syn:slr0319 beta-lactamase

DNA sequence : 
ATGAATCGAAGAAATCTGATGTGCGCCGCGCTGCTCGCCTTTCTGTCACAGGCGGCCCTGGCGGCTGCCGAACTGCAGGA
CAAGCCCGAATGGGACCGCTTCTTTGCCGATGCCAAGGTCGATGGCAGCATCGTCGTGGTCGATGCCAGAGGCCAGGCCG
AAGCCGTCTACGTCCACAACCGTGACCGGGCGGCGCGGCGCTACTCGCCCGCCTCCACCTTCAAGATCCCGCACAGCCTG
TTCGCACTGGATGCCGGGCTGTTGCGCGATGAATTCCAGCGCATTCCCTGGGATGGCGTGAAGCGCCAGTTGCCGGCCTG
GAATGCCGATCAGGACCTGCGCTCGGCCATGCGCAACTCCACCGTCTGGGTGTACGAAGGCTTTGCCAGGGAGCTTGGCA
GCGCGCGTGAGGCTGCCTACATGCGCAAGATCGACTACGGCAATGCGCTGGCCACAGGCGAGGCGCCGTTCTGGGTGGAG
GGCGACCTGGCCATCTCGGCGCTGGAGCAGGTGGCCTTCCTGCAGCGGCTGTACCGCAATCGGCTGCCATTGCCGGTGGA
GCACCAGCGGCTGGTGAAGGACGTGATGATCAACGAGGCAGGCCCGGACTGGATACTGCGCGCCAAAACCGGCTGGACGG
GCCGTATCGGCTGGTGGGTGGGCTGGGTGGAATGGCCGGCCGGCCCCGTGTTCTTCGCCATGAACATGGACACGCCCCAC
CGGCTGGCCGACCTGCCCAAGCGCCAGGACATCACGCGCGACATCCTGCGCTCCATCAACGCGTTGCCCAAGGCGCCGTA
G

Protein sequence : 
MNRRNLMCAALLAFLSQAALAAAELQDKPEWDRFFADAKVDGSIVVVDARGQAEAVYVHNRDRAARRYSPASTFKIPHSL
FALDAGLLRDEFQRIPWDGVKRQLPAWNADQDLRSAMRNSTVWVYEGFARELGSAREAAYMRKIDYGNALATGEAPFWVE
GDLAISALEQVAFLQRLYRNRLPLPVEHQRLVKDVMINEAGPDWILRAKTGWTGRIGWWVGWVEWPAGPVFFAMNMDTPH
RLADLPKRQDITRDILRSINALPKAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
blaOXA-2 YP_005176242.1 beta-lactamase OXA-2 protein Not tested ICEPmu1 Protein 4e-74 63
ACICU_00226 YP_001844885.1 Beta-lactamase class D Not tested AbaR20 Protein 9e-73 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_2332 YP_001563355.1 beta-lactamase AF300985.1.gene1.p01 Protein 5e-71 63
Daci_2332 YP_001563355.1 beta-lactamase AF315351.1.gene2.p01 Protein 4e-74 63
Daci_2332 YP_001563355.1 beta-lactamase M95287.gene.p01 Protein 2e-74 63
Daci_2332 YP_001563355.1 beta-lactamase EF552405.1.gene1.p01 Protein 4e-74 63
Daci_2332 YP_001563355.1 beta-lactamase GQ202693.1.gene2.p01 Protein 2e-74 63
Daci_2332 YP_001563355.1 beta-lactamase U63835.1.gene1.p01 Protein 2e-74 63
Daci_2332 YP_001563355.1 beta-lactamase JF795487.1.gene1.p01 Protein 2e-73 63
Daci_2332 YP_001563355.1 beta-lactamase AF350424.1.gene1.p01 Protein 3e-69 62
Daci_2332 YP_001563355.1 beta-lactamase AF371964.1.gene1.p1 Protein 7e-75 62
Daci_2332 YP_001563355.1 beta-lactamase AY139598.1.gene3.p01 Protein 9e-75 62
Daci_2332 YP_001563355.1 beta-lactamase JF800667.1.gene2.p01 Protein 1e-73 62
Daci_2332 YP_001563355.1 beta-lactamase L07945.1.gene1.p01 Protein 7e-75 62
Daci_2332 YP_001563355.1 beta-lactamase AY289608.1.gene2.p01 Protein 3e-74 62
Daci_2332 YP_001563355.1 beta-lactamase AF317511.1.gene5.p01 Protein 5e-73 61
Daci_2332 YP_001563355.1 beta-lactamase Y10693.2.gene1.p2 Protein 1e-74 61
Daci_2332 YP_001563355.1 beta-lactamase DQ522237.1.gene5.p01 Protein 1e-74 61
Daci_2332 YP_001563355.1 beta-lactamase AF024602.1.gene3.p01 Protein 4e-73 60
Daci_2332 YP_001563355.1 beta-lactamase AY500137.1.gene1.p01 Protein 3e-46 46
Daci_2332 YP_001563355.1 beta-lactamase JN205800.1.gene6.p01 Protein 1e-44 44
Daci_2332 YP_001563355.1 beta-lactamase HM015773.1.gene6.p01 Protein 1e-44 44
Daci_2332 YP_001563355.1 beta-lactamase HQ700343.1.gene1.p01 Protein 8e-46 44
Daci_2332 YP_001563355.1 beta-lactamase AY343493.1.gene1.p01 Protein 2e-42 44
Daci_2332 YP_001563355.1 beta-lactamase AY423074.1.gene1.p01 Protein 4e-38 42