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Name : Daci_1908 (Daci_1908) Accession : YP_001562933.1 Strain : Delftia acidovorans SPH-1 Genome accession: NC_010002 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2109476 - 2110792 bp Length : 1317 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGATATCCTTCTTCTTCGCAAAGACCTTGACTCGGCCGTCGCACGGCTGGAGACCCGCAAAAAGCCCCAGGCCTT CCTGAATGTGGAGGCCTTCCAGTCCCTGGAAGCAGAGCGCAAGTCCCTGCAGACACGGACCGAGGAGCTGCAGTCCAAGC GCAACCAGCTGTCCAAGCAGATCGGCATGCTGATGGGCAAGGGCGAGAAGGACGCTGCCGAGGCCGCCAAGGCCGAAGTC GGCAGCCTCAAGACCGAGCTGGACCAGTCGGCCACGCGCCTGGAGCAGATTCAGGGCGAGCTGCAGACCATGCTGCTGGC CGTGCCCAACCTGCCGCACGACAGCGTGCCCGTCGGTGCGGACGAAAGCGGCAATGTGGAGGCGCGCCGCTGGGGCACGC CCAAGACCTTTGATTTCGAGGTCAAGGACCATGTGGACGTGGGCCAGCCGCTGGGACTGGACTTCGACATGGGCGTCAAG CTGTCGGGCTCGCGCTTCACCGTGATGAAGGGCCCCATCGCCCGCCTGCACCGCGCCCTGGCGCAGTTCATGATCGACCT GCAGACCGACTCGCATGGCTACACCGAGTGCTATGTGCCCTACGCCGTCAATGCCGACTCGCTCAAGGGCACGGGCCAGT TGCCCAAGTTCGAGGGCGACCTGTTCGCCGCCAAGAAGGGCGGCCAGGACGGCGAGCCGGTGCCCGACAACGCGGCGCTC TACCTGATTCCCACGGCCGAGGTGCCGCTGACCAACTTCGTGCGCGACGTGGTCGTGGCCGAGGACCAGCTGCCCATCAA GCTCACGGCCCACAGCCCCTGCTTCCGTTCCGAGGCCGGCAGCTATGGCCGCGACACGCGCGGCATGATCCGCCAGCACC AGTTCGACAAGGTCGAGATGGTGCAGATCGTGCATCCGGAAAAGAGCTACGAGGCGCTGGAAGAAATGACGGGCCACGCC GAGGCCGTGCTGCAGAAGCTGGGCCTGCCCTACCGCGTGATGAGCCTGTGCACGGGCGACATGGGCTTTGGCGCGGCCAA GACCTATGACCTGGAAGTCTGGCTGCCTGCGCAGAACACCTACCGCGAGATCAGCTCGGTCTCCAACTGCGAGGCCTTCC AGGCCCGCCGCCTGCAGGCACGCTTCAAGAACGCCCAGGGCAAGAACGAGCTGGTGCACACGCTCAACGGTTCCGGCCTG GCCGTGGGCCGCACGCTGGTGGCTGTGCTGGAGAACTACCAGAACGCCGACGGCTCGGTGACCATCCCCGAGGCGCTGCG CCCGTACATGGGTGGACAGACTTTGCTGAAGGCCTGA Protein sequence : MLDILLLRKDLDSAVARLETRKKPQAFLNVEAFQSLEAERKSLQTRTEELQSKRNQLSKQIGMLMGKGEKDAAEAAKAEV GSLKTELDQSATRLEQIQGELQTMLLAVPNLPHDSVPVGADESGNVEARRWGTPKTFDFEVKDHVDVGQPLGLDFDMGVK LSGSRFTVMKGPIARLHRALAQFMIDLQTDSHGYTECYVPYAVNADSLKGTGQLPKFEGDLFAAKKGGQDGEPVPDNAAL YLIPTAEVPLTNFVRDVVVAEDQLPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVHPEKSYEALEEMTGHA EAVLQKLGLPYRVMSLCTGDMGFGAAKTYDLEVWLPAQNTYREISSVSNCEAFQARRLQARFKNAQGKNELVHTLNGSGL AVGRTLVAVLENYQNADGSVTIPEALRPYMGGQTLLKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-100 | 55 |
