Gene Information

Name : Daci_1301 (Daci_1301)
Accession : YP_001562330.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1447711 - 1448151 bp
Length : 441 bp
Strand : +
Note : TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: aav:Aave_4158 general secretion pathway protein G

DNA sequence : 
ATGATGCGCATGCAAAAGCAACTGTCCTCCCGCGCCCGCAAGCGTGGCTTCACGCTGATCGAACTGCTGGTCGTGCTGGC
CATCCTGACCCTGCTGGCCGGCCTGGTTGGCCCCAAGGTGCTGAACCAGTTGGGTGGAGCAAAGACCAAGACGGCCGGCG
TGCAGATCGCCGACATCGAAAAGGCGCTGGAGCTGTACAAGCTCGACGTGGGCCGCTACCCCACCTCGCAGCAGGGCCTG
GACGCGCTGGTCAAGCAGCCGGCCGGCGTTGCCGGCTGGGCGGGGCCCTACCTCAAGGGCGGCGTGCCCAATGATCCCTG
GAACAACCCTTACCGCTACACCTACCCGGCTGCCAATGGCGACCTCGAAATCCTCTCGCTGGGCTCCGATGGTGCGCCTG
GCGGCGAGGGCGAGGCTTCCGACATTCGCAACACCAAGTAA

Protein sequence : 
MMRMQKQLSSRARKRGFTLIELLVVLAILTLLAGLVGPKVLNQLGGAKTKTAGVQIADIEKALELYKLDVGRYPTSQQGL
DALVKQPAGVAGWAGPYLKGGVPNDPWNNPYRYTYPAANGDLEILSLGSDGAPGGEGEASDIRNTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 9e-17 43
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-17 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_1301 YP_001562330.1 general secretion pathway protein G VFG0180 Protein 2e-16 45
Daci_1301 YP_001562330.1 general secretion pathway protein G VFG2050 Protein 3e-17 43
Daci_1301 YP_001562330.1 general secretion pathway protein G VFG1871 Protein 4e-16 42