Gene Information

Name : Daci_0127 (Daci_0127)
Accession : YP_001561158.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 138528 - 139286 bp
Length : 759 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_4324 ABC transporter-related protein

DNA sequence : 
ATGAACGTGATGAATGCCCACTCCCCCGCGCCCACGGCGGCGCCCCGCACGGCACCCAGCCTGGAGGCCGTGCGCCTGTG
CAAGTCTTTCCTGTCGGGCATGGTCAGCGTGCAGGTGCTGCAAGGCCTGTCCGTGTCGCTGTACCCGGGCGAGCTGAGCC
TGATCTCCGGGCCCTCGGGCTGCGGCAAGAGCACGCTGCTGTCGCTGATGTCGGGCCTGCAGGCGCCCGACAGCGGCCAC
GCCATGGCGCTGGGCGAGGACCTGGGCAAGCTGGGCACGCGGGCGCTGGAGAAATTCCGCCTGCGCCACACGGGCTTCGT
CTTCCAGGGCTTCAACCTGTTCCCGGCGCTGACGGCCATCGAGCAGGTACAGCTGCCCCTGGGCTACATGGGCCTGCGCA
GCGACGAGGCCCTGCGCCGCGCCCAGCAGGCGCTGGACGAGGTCGGCCTGTCCCACCGCAGCCACATGCGCCCGGCCGAA
CTGTCGGGCGGCGAAAAGCAGCGCGTGGCCATCGCCCGCGCCATGGCCAAGGCGCCGCAGCTGCTGTTTGCCGACGAACC
CACGAGTGCGCTGGATGCCGAAAGCGGCCAGCGCGTCATCGACATCCTGCACCGCGCGGCGCGCAACCATGGCACGACCG
TGCTGTGCGTGAGCCATGACCCGCGCCTGGTGCGCCATGCCGACCGCGTGCTCGGCATGGAGGACGGCGCCATCCGCAGC
GACTGGCGCCAGTCCTGCCCCATCAAGGAAAAAGAATGA

Protein sequence : 
MNVMNAHSPAPTAAPRTAPSLEAVRLCKSFLSGMVSVQVLQGLSVSLYPGELSLISGPSGCGKSTLLSLMSGLQAPDSGH
AMALGEDLGKLGTRALEKFRLRHTGFVFQGFNLFPALTAIEQVQLPLGYMGLRSDEALRRAQQALDEVGLSHRSHMRPAE
LSGGEKQRVAIARAMAKAPQLLFADEPTSALDAESGQRVIDILHRAARNHGTTVLCVSHDPRLVRHADRVLGMEDGAIRS
DWRQSCPIKEKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-26 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-26 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_0127 YP_001561158.1 ABC transporter-like protein NC_008702.1.4606598. Protein 6e-31 47
Daci_0127 YP_001561158.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-34 44
Daci_0127 YP_001561158.1 ABC transporter-like protein NC_012469.1.7685735. Protein 4e-32 43