Gene Information

Name : Daci_1054 (Daci_1054)
Accession : YP_001562084.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 1163901 - 1165592 bp
Length : 1692 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA0072 ABC transporter ATP-binding protein

DNA sequence :
ATGAGCGCCGCCATCGAGGAGCGCATCCACGCCGCACCAGCGGTGGCAACGACCGCCCCCGTGCTCGAAGTGCAGGACCT
GGCCGTGGCCTACCGCGATGCCGCAGGCCAGGCGCAGCGCGTGGTGCACGGCGTGTCGTTTTCCGTGGCGCCGGGCGAGG
TGGTGGCCCTGGTCGGCGAATCGGGCTCGGGCAAGACCACCACGGCCCAGGCCGTGATCGGCCTTTTGGCCGACAACGGC
CACCGCGAGCACGGCAGCATCCGCCTGCAGGGCACCGAGGTCTCGGGCTGGCCGGCCGCACGCTGGAACGCCATCCGCGG
CCGCGTGGTCAGCCTGGTGCCGCAGGACCCCACCATGTCGCTGAACCCCGTGCGCACGGTAGGCGACCAGGTGGGCGAGA
TCCTGCGCATCCACGGCCTGCGCGACCGCACGGCCGTGGAGGCGCGCGTGCTGGAGCTGCTGGACCGCGTGGGGCTGTCC
CAGCCCGCGCTGCGCGCACGCCAGTATCCGCACGAGCTGTCGGGCGGCATGCGCCAGCGCGTGCTGATCGCCATCGCCAT
CGCGCTGCGGCCCGCCCTCATCATTGCCGACGAGCCCACCAGCGCGCTGGACGTGACCGTGCAGCGGCGCATCCTGGACC
TGATCGACGCGCTGCGCCGCGAGACCGGCACGGCCGTGCTGCTGGTCACGCATGACCTGGGCGTGGCGGCCGACCGTTCA
CACCGCCTGGTCGTCATGCAGGGCGGCCGCATCCAGGAGCAGGGCCCCACGCTGGAGCTGCTGCGCAATCCGCAAAGCGC
CTATACGCGGCGGCTGCTGGCCGATGCGCCTTCCCTGGCGCCCGCACCGCGCCGCACGCCCAGGCCCGCCACGGCCGATG
ACTGGGCCATCGAGGTCGAGGACCTGGTGCACGAGTTCGCGGCGCCCGGCCATGCCTCGGCCCACGGGCGCGGCATCTTC
CGTGCCGTGGACGGCGTGTCGCTGCGCGTGCGCCGGGGCAGCACGCATGCCATCGTGGGCGAGTCGGGCTCGGGCAAGAC
CACCACCATCCGCGCCATCGTGGGCCTGGGCCGGCCCACGGCGGGCCGCATCCGCATCGAAGGCACCGAGGTCACGGGCC
TGCGCGGCGAGGCCCTGCGCCAGCTGCGCCGCCGCGTGCAGCTGGTCTACCAGAACCCGTTCAGTTCTCTGGACCCGCGC
CAGAGCGTGTTCGACATCATCGAGGAGCCCCTGCTGAACTTCGACCCGCTGCCGGCCGATGAGCGCCGCCAGCGCGTGCA
CGACATGCTGGAGCGCGTGGGCCTGCCTGCCGCCGTGCTGCAGCGGCGCCCGCATGCGCTGTCGGGCGGCCAGCGCCAGC
GCGTGGCGATTGCGCGCGCCCTGGTGCTGCAGCCGCAGGTGCTGGTGCTGGACGAGGCCGTATCGGCCCTGGACGTGACG
GTGCAGGCGCAGATCCTGGCCCTGCTCGCCCAGCTGCAGCAGGACCTGGGGCTGACCTATCTCTTCATCTCGCACGACCT
TGCCGTGGTGCGCCAGATCGCCGACACGGTGTCGGTGCTGCGCGCGGGCCGGGTGGTGGACGCGGGCAGCGTGGAGGAAG
TGTTCCAGCGCCCGACCAGCGACTACACGCGCGAACTCATGGACGCCATTCCCGGCAAAAGGAGCATTGATTTTGTCCCT
CATACCGCCTGA

Protein sequence :
MSAAIEERIHAAPAVATTAPVLEVQDLAVAYRDAAGQAQRVVHGVSFSVAPGEVVALVGESGSGKTTTAQAVIGLLADNG
HREHGSIRLQGTEVSGWPAARWNAIRGRVVSLVPQDPTMSLNPVRTVGDQVGEILRIHGLRDRTAVEARVLELLDRVGLS
QPALRARQYPHELSGGMRQRVLIAIAIALRPALIIADEPTSALDVTVQRRILDLIDALRRETGTAVLLVTHDLGVAADRS
HRLVVMQGGRIQEQGPTLELLRNPQSAYTRRLLADAPSLAPAPRRTPRPATADDWAIEVEDLVHEFAAPGHASAHGRGIF
RAVDGVSLRVRRGSTHAIVGESGSGKTTTIRAIVGLGRPTAGRIRIEGTEVTGLRGEALRQLRRRVQLVYQNPFSSLDPR
QSVFDIIEEPLLNFDPLPADERRQRVHDMLERVGLPAAVLQRRPHALSGGQRQRVAIARALVLQPQVLVLDEAVSALDVT
VQAQILALLAQLQQDLGLTYLFISHDLAVVRQIADTVSVLRAGRVVDAGSVEEVFQRPTSDYTRELMDAIPGKRSIDFVP
HTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-95 48
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-71 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-71 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-71 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-71 43