Gene Information

Name : Daci_1008 (Daci_1008)
Accession : YP_001562039.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4604
EC number : -
Position : 1121616 - 1122374 bp
Length : 759 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_3854 putative iron ABC transporter, ATP-binding protein

DNA sequence : 
ATGATCGAGGTGCGTGATCTGCTCAAGCGCCATGGCGGCACGGCAGTGCTGCAGGAGCTCAATTTCGATGTGCCCGAGCG
GGCGCTGACGGCCATCATCGGGCCCAACGGTGCGGGCAAGTCCACGCTGCTGTCCCTGGTCAGCCGCCTCATGCCCATCA
CGGCGGGCAAGGTGCGGGTGGCCGGCCTCGACGTGGCCACCACGCCCACCGAGGCGCTGGCGCGCATCATGGCCATCCTG
CGCCAGGACAACCAGAGCACGCTGCGCCTGACGGTGCGCGACCTGGTGGGCTTTGGCCGCTTTCCGCACAGCAAGGGCCG
GCTGGGCCCCGAAGACCTGCGCCATGTGGACGAGGCGATGGAGTACCTGCAGCTCACGCCGCTGGCCGAGCGCTTTCTCG
ACGAGCTGTCAGGCGGCCAGCGCCAGCGCGCCTACATCGCCATGGTGCTGTGCCAGGACACGCCCTTCATCCTGCTGGAC
GAGCCGCTGAACAACCTGGACATGGCCCACGCCGTCAGCATGATGGGCCTGCTGCGCCGCGCCGTCACCGAACGCGGCAA
GACCGTGGTCATGGTGCTGCACGACATCAACTTCGCCTCCTGCTACGCCGACCACATCATCGCGCTCAAGGACGGCCGCC
TGGCCGTGGCGGGCACGCCGGCCGAGGTCGTGCAGGACGAGGTCCTCAGCAGCCTCTACGGCATCCCCGTCAGCGTGCAC
GAAGTCAAGGGCCGCAGGCTTTGCCATTACTTTGGTTGA

Protein sequence : 
MIEVRDLLKRHGGTAVLQELNFDVPERALTAIIGPNGAGKSTLLSLVSRLMPITAGKVRVAGLDVATTPTEALARIMAIL
RQDNQSTLRLTVRDLVGFGRFPHSKGRLGPEDLRHVDEAMEYLQLTPLAERFLDELSGGQRQRAYIAMVLCQDTPFILLD
EPLNNLDMAHAVSMMGLLRRAVTERGKTVVMVLHDINFASCYADHIIALKDGRLAVAGTPAEVVQDEVLSSLYGIPVSVH
EVKGRRLCHYFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-36 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-36 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-34 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-34 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-34 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_1008 YP_001562039.1 ABC transporter-like protein BAC0164 Protein 9e-37 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_1008 YP_001562039.1 ABC transporter-like protein VFG0925 Protein 2e-38 43
Daci_1008 YP_001562039.1 ABC transporter-like protein VFG1042 Protein 8e-37 42