|
Name : Cphy_0742 (Cphy_0742) Accession : YP_001557868.1 Strain : Clostridium phytofermentans ISDg Genome accession: NC_010001 Putative virulence/resistance : Unknown Product : two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 956207 - 956944 bp Length : 738 bp Strand : - Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: lmf:LMOf2365_2658 DNA-binding response regulator KdpE DNA sequence : ATGAAGAATACTACCATCTTGATTATCGAAGATGAACAAAATATTTGTAACTTTATAGCAACGAATTTAAATGCTTATGA TTATAGGGTACTAAAAAGCTTTACTGGTGCAGAGGGTCTATCTATCATCACATCCCACTGTCCAGATTTAATCCTACTGG ATTTAGGCTTACCAGATATCGACGGAATGGAGATTATATCGAAGATTCGCTCTTGGTCAACTATTCCAATTATTGTTATT TCAGCACGGACTCAAGAAAAGGAAAAAGTTCAAGCTCTTGATTTAGGTGCGGATGATTATATTACGAAGCCTTTTGGTAC CTCAGAATTACTAGCACGTATCCGTACCGCTCTACGTCATAATGCAAGTTTGGAATCTGGTAAGAATTTTCCGCCATCTA TCTTTCGCGCCAAAGATTTCGTAATTGACTTTAATAAGCACATTGTAATGGTCGGAGGAAAAGATGTACATTTAACACAG ATAGAATTTAAACTTGTTTCTTTGCTTGCTAACAATTCTGGAAGAGTTATGACCTATGATTCCATTATTACAAAGATATG GGGACCCTATGCAGATCGAAATAACCAGATTCTTAGAGTAAATATGGCTAACATCCGTAGAAAAATTGAGGCAAATCCTG CAGATCCACAATATATCTTTACTGAGGTAGGAATCGGATATCGTATGATTGATGAAGAGCCGATGCAAACTACTGAAGAC GAAACTATAGATAGTTAA Protein sequence : MKNTTILIIEDEQNICNFIATNLNAYDYRVLKSFTGAEGLSIITSHCPDLILLDLGLPDIDGMEIISKIRSWSTIPIIVI SARTQEKEKVQALDLGADDYITKPFGTSELLARIRTALRHNASLESGKNFPPSIFRAKDFVIDFNKHIVMVGGKDVHLTQ IEFKLVSLLANNSGRVMTYDSIITKIWGPYADRNNQILRVNMANIRRKIEANPADPQYIFTEVGIGYRMIDEEPMQTTED ETIDS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0091 | AAM75294.1 | EF0091 | Not tested | Not named | Protein | 1e-45 | 48 |
| EF0571 | NP_814337.1 | DNA-binding response regulator | Not tested | Not named | Protein | 2e-45 | 48 |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 4e-28 | 42 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 4e-27 | 41 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 4e-27 | 41 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 4e-27 | 41 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 4e-27 | 41 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 3e-27 | 41 |
