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Name : Cphy_3756 (Cphy_3756) Accession : YP_001560842.1 Strain : Clostridium phytofermentans ISDg Genome accession: NC_010001 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 4607336 - 4608664 bp Length : 1329 bp Strand : - Note : TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: cth:Cthe_2256 replicative DNA helicase DNA sequence : ATGGATGAGGCATTTATTAAGAAGATTCAACCGCATAGTGCAGAAGCCGAGCAATCGGTAATCGGCTCCATGATTATGGA CCGAGATGCGATTATTACTGCCTCAGAAATATTGAATGCAGAAGATTTTTATCAGCATCAGTATGGAGTATTATACGATG CTATGATAGAACTGTTTCAGGAAGGAAAACCTGTAGATTTAATTACATTACAGAGTAAGTTAAAAGAAAAGGAAGTACCT CCGGAATTATGTAGCTTAGAGTTTATCAGTGATTTGATTCGTTCGGTTCCAACCTCAGCGAATGTAAAGTATTATGCAAC GATCGTTAGTGAAAAGGCATTACTTCGCCGTTTGATTAAGGTGACAGAAGGAATCACCAACATGTGCTATCTTGATAAAG AGAAGGTAGAAGTGGTTTTAGAACAAACTGAGAAAGATGTTTTTAGTATTGTTCAAAACCGTAGTTCTGGTGATTTTGTA AGTATCAAAGATATTGTTATCAAATCCCTGGATAGTATTGAGGCAGCGTCAAAGAATAAGGGTAGCGTAACAGGTATCGC TACTGGTTTTTATGATTTGGATTATAAAATGGCTGGCCTACAGCCATCGGATTTAATATTGATTGCAGCAAGACCTTCTA TGGGAAAAACAGCGTTTGTCTTAAATATAGCGGAATATGTTGCAGTACGAAGTAAAATAACGACAGCAATCTTTAGTCTA GAAATGTCAAAGAACCAGCTTGTAAATCGTATCTTATCGATGAACTCCAAAGTTGACTCTCAAGCAATCCGAAGCGGTGA GCTAAATGACGAGGACTGGGCAAAATTAATGGAGAGTGCAAGAACTGTTGGTGAGTCCGGGTTAATTATTGATGACACAC CAGGTATTTCGATAACAGAGCTTCGTTCAAAGTGTAGAAAGTTTAAGTTAGAACATAATCTTGGATTGATCATTATCGAC TATCTTCAGTTAATGTCAGGTGGTAAGAAAGCAGAATCGAGACAACAAGAAATATCAGAGATCTCTCGTTCTTTAAAAGC ATTAGCTAGAGAGGTTAACTGTCCGGTAATTGCATTGTCTCAGTTATCTCGTGCGGTAGAGCAACGTCCGGATAAAAGAC CAATGCTATCTGACCTTCGTGAATCTGGTGCAATTGAGCAGGATGCCGACGTTGTTATGTTTATTTACCGAGATGATTAT TATAATCATGATTCCGAGGATGCTGGTGTATCAGAAATTATAATTGGTAAACAAAGAAATGGTCCAACAGGAACTGTAAA ACTTGCTTGGTTATCTCAGTTTACAAAATTTGCGAACTTAGAGCGATAG Protein sequence : MDEAFIKKIQPHSAEAEQSVIGSMIMDRDAIITASEILNAEDFYQHQYGVLYDAMIELFQEGKPVDLITLQSKLKEKEVP PELCSLEFISDLIRSVPTSANVKYYATIVSEKALLRRLIKVTEGITNMCYLDKEKVEVVLEQTEKDVFSIVQNRSSGDFV SIKDIVIKSLDSIEAASKNKGSVTGIATGFYDLDYKMAGLQPSDLILIAARPSMGKTAFVLNIAEYVAVRSKITTAIFSL EMSKNQLVNRILSMNSKVDSQAIRSGELNDEDWAKLMESARTVGESGLIIDDTPGISITELRSKCRKFKLEHNLGLIIID YLQLMSGGKKAESRQQEISEISRSLKALAREVNCPVIALSQLSRAVEQRPDKRPMLSDLRESGAIEQDADVVMFIYRDDY YNHDSEDAGVSEIIIGKQRNGPTGTVKLAWLSQFTKFANLER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 4e-77 | 42 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-72 | 42 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 3e-70 | 42 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-72 | 42 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 3e-68 | 41 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-74 | 41 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 4e-75 | 41 |
