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Name : Cphy_0338 (Cphy_0338) Accession : YP_001557464.1 Strain : Clostridium phytofermentans ISDg Genome accession: NC_010001 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 425701 - 427869 bp Length : 2169 bp Strand : + Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: mmp:MMP1127 RNA binding S1 DNA sequence : ATGAAAATTTTCGAACAATTAAAAGAAGAGTTAGGAATTAAACTGGAACAGGTCGAAGCTACTGTAAAGCTCATCGATGA GGGAAATACGATACCTTTTATTGCTAGATATCGAAAAGAGGTTACCGGTTCTTTAAATGATGAGGTACTACGAAGTCTAT CAGAGCGTTTAACCTATCTGCGAAACTTGGAAGAGAAGAAGGCTTCTGTACTTGCAAGTATCGAAGAACAGGGAAAATTA ACAGAAGAGTTAAAGGCACAGATTGAAGCTGCGGCAACCTTAGTAGTAGTAGAAGACTTATATCGCCCATATCGTCCAAA ACGTAGAACCAGAGCGACAATTGCAAAAGAGAAGGGATTGGAGCCACTGGCAGAAATCATCATTGCTCAGGAAATTTCTA GGGATATCTTAGAATTAGCAGAAGACTATGTATCGGAAGAGAAGGAAGTAAGTTCTGCTAAAGACGCTGTAGCAGGAGCA CTGGATATTATTGCAGAAAGCATCTCTGATGAAGCGGATTATCGTATCCACATACGTAAGCTTACCTTTGAAGAAGGAAG TATAACTTCCGCCGCAAAGGATGCAGAAGCCGAATCTGTATATGAACTTTATTATGAATATAGTGAAAAAATTTCTAAGG TAGCGGGTCACAGAGTTTTAGCCTTAAATCGCGGTGAAAATGAGAAATTTCTTACAGTAAAGATTACAGCGCCAACTGAG AAAATAATGAATTATCTTAAGGGTAAAGTGATAAAGAGAGATAATCCACATACCAATGATTATCTTGTAGTAGCAATTGC AGATAGTTATGACCGTTTAATCGCACCTGCAATTGAACGTGAGATCAGAAACGATTTGACGGAAAAAGCAGAGGATGGTG CAATTGTAGTCTTTGGCCAGAACTTAACTCAAGTATTAATGCAGCCTCCAATTGCTGGACAAGTTGTACTTGGATGGGAT CCAGCGTTTCGTACCGGTTGTAAGCTGGCTGTAGTAGATGCAACAGGAAAGGTATTAGATACTGTAGTAATCTATCCGAC AGCACCACAAAATAAGGTAGAGGAAGCGAAGACAGTTTTAAAGAAATTATTTAAGAAATATCAGATTACCTTAATTTCTG TTGGAAATGGTACTGCTTCCAGAGAATCCGAGCAGATTATTGTAGACTTATTAAAAGAAATTACTGAGCCAATCTCTTAT GTAATTGTAAATGAGGCTGGAGCATCGGTATATTCAGCAAGTAAGTTAGCAACCGAGGAGTTTCCTAATTTTGATGTTGG ACAAAGAAGTGCCGCTTCTATTGCAAGAAGAATTCAGGACCCATTAGCTGAGTTAGTAAAGATTGATCCTAAATCGATCG GCGTAGGTCAATATCAACACGATATGAACCAAAAGAAACTAAGCGAAGCATTAGGCGGAGTTGTAGAAGATTGTGTAAAT AAAGTTGGAGTAGATCTAAATACTGCATCAGCTTCCTTACTTGAATATATTTCTGGAATTTCAAAACCAATCGCTAAGAA TATTGTTATTTACCGTGAGGAAAATGGAAAGTTTAAGAATCGAAAGCAATTATTAAAGGTTGCGAAACTTGGGCCAAAGG CTTTTGAACAATGTGCAGGATTTTTACGAATTAATGATGGAGATAATCCTCTGGATGGAACTAGTGTGCATCCAGAATCT TATGAAGCAGCTGAAAAACTTCTAGAGATGCTTGAAGTGAAAGATTTAAGAGAGTTACAAGCGAAAGCAAAAGAAGTAGA TGCTAAAAGAGAACAATCGATTAGCCAGAAAGTTAAGGATAAAAAGAAGATGGCACAGGAGCTTTCGATTGGTGAAATTA CTTTAACTGATATCATTAAGGAATTAGAAAAACCAAGCAGAGACCCAAGAGAAGAGATGCCAAAACCAATCTTAAGAACC GATGTTCTTGATATGAAAGACTTAACTGAGGGTATGATTTTAAAGGGTACTGTACGTAATGTCATTGATTTTGGAGCATT TGTTGATATTGGAGTTCATCAAGATGGTTTGGTTCATATATCACAATTGTCAAAGCAGAAATTTGTTAAGCACCCACTTG ATATCGTTAGTGTAGGAGATATAGTGGAAGTAAAAGTTTTAAGTGTAGATGTATCGAAAAAAAGAATACAACTCTCTATG ATTTTATAA Protein sequence : MKIFEQLKEELGIKLEQVEATVKLIDEGNTIPFIARYRKEVTGSLNDEVLRSLSERLTYLRNLEEKKASVLASIEEQGKL TEELKAQIEAAATLVVVEDLYRPYRPKRRTRATIAKEKGLEPLAEIIIAQEISRDILELAEDYVSEEKEVSSAKDAVAGA LDIIAESISDEADYRIHIRKLTFEEGSITSAAKDAEAESVYELYYEYSEKISKVAGHRVLALNRGENEKFLTVKITAPTE KIMNYLKGKVIKRDNPHTNDYLVVAIADSYDRLIAPAIEREIRNDLTEKAEDGAIVVFGQNLTQVLMQPPIAGQVVLGWD PAFRTGCKLAVVDATGKVLDTVVIYPTAPQNKVEEAKTVLKKLFKKYQITLISVGNGTASRESEQIIVDLLKEITEPISY VIVNEAGASVYSASKLATEEFPNFDVGQRSAASIARRIQDPLAELVKIDPKSIGVGQYQHDMNQKKLSEALGGVVEDCVN KVGVDLNTASASLLEYISGISKPIAKNIVIYREENGKFKNRKQLLKVAKLGPKAFEQCAGFLRINDGDNPLDGTSVHPES YEAAEKLLEMLEVKDLRELQAKAKEVDAKREQSISQKVKDKKKMAQELSIGEITLTDIIKELEKPSRDPREEMPKPILRT DVLDMKDLTEGMILKGTVRNVIDFGAFVDIGVHQDGLVHISQLSKQKFVKHPLDIVSVGDIVEVKVLSVDVSKKRIQLSM IL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 5e-146 | 47 |
