Gene Information

Name : Cphy_3507 (Cphy_3507)
Accession : YP_001560595.1
Strain : Clostridium phytofermentans ISDg
Genome accession: NC_010001
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 4325737 - 4326372 bp
Length : 636 bp
Strand : -
Note : PFAM: sugar transferase; KEGG: amt:Amet_0201 sugar transferase

DNA sequence : 
ATGTTTTATTTGAAAATTAAAAGATTAATGGATTCTATTATTTCATTAATAGCACTTATATTATTATCTCCATTATTCTT
GATTTTAATAATTGCTATTAAAATTGATTCAAGAGGACCAGTTTTATTTAAGCAGAAAAGAGTTGGTAGACATAAAAGCT
ATTTTAATATATTAAAGTTTCGAACTATGAGGATAGATACTCCAAAGGATACTCCTACACATATGTTAGAAAATCCAGAT
TATTGGATTACAAGAGTTGGTAAGTTCTTAAGAAAAACAAGTTTAGATGAGTTACCACAAATTTTTAACATAATTAAAGG
TGATATGAGTATTATTGGACCTAGGCCAGCACTCTGGAATCAATATGATTTAATTGATGAGCGAGATAAATTTGGTGCTA
ATAATATATTACCGGGACTTACTGGATGGGCACAAATTAATGGAAGAGATGAACTCCCTATTGATGTAAAAGCAAAATTA
GATGGTGAGTATGTTAATAAAATTGGGTTTTCAATGGATGTGAAATGCTTCTTTGGAACATTTATAGCAGTTTTAAAAAG
AGATGGCGTTGTTGAAGGTGGAACAGGAACATTAGGGCATCGAAAAACTGTTAATAAGGAGACGGCTGGACAATGA

Protein sequence : 
MFYLKIKRLMDSIISLIALILLSPLFLILIIAIKIDSRGPVLFKQKRVGRHKSYFNILKFRTMRIDTPKDTPTHMLENPD
YWITRVGKFLRKTSLDELPQIFNIIKGDMSIIGPRPALWNQYDLIDERDKFGANNILPGLTGWAQINGRDELPIDVKAKL
DGEYVNKIGFSMDVKCFFGTFIAVLKRDGVVEGGTGTLGHRKTVNKETAGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 4e-33 50
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 5e-33 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cphy_3507 YP_001560595.1 sugar transferase VFG1369 Protein 2e-47 64
Cphy_3507 YP_001560595.1 sugar transferase VFG1309 Protein 9e-32 46