Gene Information

Name : Cphy_2987 (Cphy_2987)
Accession : YP_001560083.1
Strain : Clostridium phytofermentans ISDg
Genome accession: NC_010001
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 3649175 - 3649600 bp
Length : 426 bp
Strand : -
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cno:NT01CX_0884 single-stranded DNA binding protein

DNA sequence :
ATGAATAAAGTTATGATGATTTGTCGATTGACCAAAGATCCTGAGATTCGATATGGACAAGCAAATGGAACAGCGATTGC
CTCCTACGGAATTGCAGTAAACAGACGATTTAAGCGTGATGGTGAACCGGATGCAGACTTTTTCAACTGTGTATGTTTTG
GACGGAACGCCGAGTTTGCTGAGAAGTATCTTGCCAAGGGAAGTAAGATTGCTATTGTTGGTAGTATTCAGAATGAGAAT
TATACCAATAAAGATGGTCAAAAAGTTTACTCTACAAAAATTCTTGTAGACGAGATGGAATTTGCAGAAAGTAAGAGCTC
CGGAAGTGACTATCAGCAATCATCAAGACCTGCACCAAGTGAAGCTAGCGGTGATGGGTTTATGAACATTCCGGACGGCA
TTGACGAAGAACTACCATTTAATTAG

Protein sequence :
MNKVMMICRLTKDPEIRYGQANGTAIASYGIAVNRRFKRDGEPDADFFNCVCFGRNAEFAEKYLAKGSKIAIVGSIQNEN
YTNKDGQKVYSTKILVDEMEFAESKSSGSDYQQSSRPAPSEASGDGFMNIPDGIDEELPFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 8e-30 51
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 1e-15 44
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 5e-18 44
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 1e-17 44
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 7e-18 42
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 2e-17 42