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Name : Cphy_2865 (Cphy_2865) Accession : YP_001559964.1 Strain : Clostridium phytofermentans ISDg Genome accession: NC_010001 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 3514882 - 3515346 bp Length : 465 bp Strand : - Note : TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: tte:TTE0985 tmRNA-binding protein DNA sequence : ATGGCAAAAGAAGGTATTAAGCTAATTGCAAATAATAAAAAAGCCAGATTCGACTATTTCATAGAGGAAACGTATGAAGC TGGTGTCGTATTACACGGCACCGAAGTAAAATCCCTACGTATGGGAAAATGCAGTATTAAAGAATCCTTTATGCGTATTG AAAATGGGGAAGTTTATGTTTATAACATGCATATAAGCCCATATGAAAAAGGAAATATATTTAACAAAGATCCATTGCGT GTTAAAAAGTTATTACTTCATAAATTTCAGATAAATAAAATTGTTGGTCAGATCCAGCAAAAAGGATATACTTTGGTTCC GTTAACGATTTATCTAAAAGATAGTCTAGTAAAGATGGAAATCGGAGTAGCTAGGGGTAAGAAGCTCTATGACAAGCGAC AGGATATTGCAAAGAAAGATCAGAAAAGAGAAGCGGAGAAAGACTTTAAGGTAAAGAATCTCTAG Protein sequence : MAKEGIKLIANNKKARFDYFIEETYEAGVVLHGTEVKSLRMGKCSIKESFMRIENGEVYVYNMHISPYEKGNIFNKDPLR VKKLLLHKFQINKIVGQIQQKGYTLVPLTIYLKDSLVKMEIGVARGKKLYDKRQDIAKKDQKREAEKDFKVKNL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 5e-35 | 55 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 3e-30 | 47 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 1e-27 | 44 |
