Gene Information

Name : Cphy_2590 (Cphy_2590)
Accession : YP_001559690.1
Strain : Clostridium phytofermentans ISDg
Genome accession: NC_010001
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3164514 - 3165218 bp
Length : 705 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cac:CAC0822 ABC transporter, ATP-binding protein

DNA sequence : 
ATGTCAGCTTATGTAGAATTAATCAATGTGAAAAAAACATATCAGATGGGAGATGTCACGATAAAGGCGTCAGACGGTAT
CTCTTTTGAAATTGAAAAAGGTGAGTTTGTCGTTATCGTTGGACCAAGTGGTGCCGGAAAGACCACAGTACTTAATATCT
TAGGAGGAATGGATAGTTTAACCAGTGGCGATATTATCGTGGATGGACAAAACATTAGTAAATTCAATAAGAAAAAGCTA
ACTACCTATCGTCGTGATGATATTGGATTCGTATTTCAGTTCTATAATTTAGTACCAAATTTAACTGCTAAAGAAAACGT
AGAGCTTGCTTTACAGATATGTAAGGACCCACTAAAAGCAGAGGATGTACTAGCAGATGTGGGACTTAGTGATCGAATAA
ATAACTTTCCTGCACAGTTATCTGGAGGAGAGCAGCAGAGAGTTTCCATAGCTAGAGCACTCGCTAAAAATCCTAAATTG
TTATTATGTGATGAACCAACAGGTGCGTTAGATTATAATACAGGAAAGGCTATCTTAAAGTTATTACAAGATATGTGCAG
AAAAAATGGCATGACAGTAGTTGTCATTACGCATAATACTGCGATTGCTCCAATGGCAGACCGGCTTATTAGTATTCGTA
ATGGTAAGGTAAAGGAAATGAAAAAGATAGAAAATCCTGTTGATGTTGAAACAATAGAATGGTAA

Protein sequence : 
MSAYVELINVKKTYQMGDVTIKASDGISFEIEKGEFVVIVGPSGAGKTTVLNILGGMDSLTSGDIIVDGQNISKFNKKKL
TTYRRDDIGFVFQFYNLVPNLTAKENVELALQICKDPLKAEDVLADVGLSDRINNFPAQLSGGEQQRVSIARALAKNPKL
LLCDEPTGALDYNTGKAILKLLQDMCRKNGMTVVVITHNTAIAPMADRLISIRNGKVKEMKKIENPVDVETIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-29 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 6e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-36 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cphy_2590 YP_001559690.1 ABC transporter NC_012469.1.7685735. Protein 1e-69 62
Cphy_2590 YP_001559690.1 ABC transporter CP001581.1.gene598.p Protein 2e-42 47
Cphy_2590 YP_001559690.1 ABC transporter NC_012469.1.7686878. Protein 1e-40 44
Cphy_2590 YP_001559690.1 ABC transporter CP001581.1.gene798.p Protein 2e-43 42
Cphy_2590 YP_001559690.1 ABC transporter NC_012469.1.7686946. Protein 3e-24 41