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Name : Cphy_2574 (Cphy_2574) Accession : YP_001559674.1 Strain : Clostridium phytofermentans ISDg Genome accession: NC_010001 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 3142451 - 3143920 bp Length : 1470 bp Strand : - Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: swo:Swol_0116 lysyl-tRNA synthetase DNA sequence : ATGGGTATTCAAGAATTGGAAGAAAACAGAAGACAAAAGTTAGAGCTTGTGAAGGAACATCAAAATCCTTATCCAGAGAG ATATCAAGTAACTCATGAATTAAAAGATGCAATTAAACTTTTGGATGGAACGAAGGATATATCAGTTGCAGGAAGGATAT TATCCATCCGAAGGATGGGAAAGCTTTGCTTTGTTAACATTGGTGATATTTATGGTAAATTACAAGTTGCCATACGAAGG GATGATGTAGGAGAAGAAGCGTATGAGTTTTTTCGACAGGGTTTTGATATTGGTGATTTTCTTGGTGTATCTGGAGAAAT ATTCACTACGCAAACAGGAGAAAAGACGATACGAGCACAGAAACTTACGTTTCTTGGTAAGGCTTTCAAACCACTCCCAG AGAAATTCCATGGGATCACTGATAAAGATAGTTGCTATCGTCAGAGATATCTTGACTTAATTATGAATGAGGATACTAGA AACCGATTTTTATTAAAATTTCAAATGATAAAGGAAATAAGAAGATACTTAGAAGATTCTGGATATCTTGAAGTAGAGAC ACCAGTATTAAATGATAAACCGTCAGGAGCAACTGCACGTCCATTTATTTCTCATCACAATGCACTCGATATGGAAGTAA ACTTAAGAATTGCACCAGAAACCTATCTAAAACGATGTATTGTAGGTGGTATTCCTAAGGTATTTGAATTTGCTAGGTGC TTTCGTAATGAGGGCATGGATGCAACTCATTTGCAAGATTTCACAATGTTAGAGGGTTATTGTGCATATTATAATTATAC TGATAACATGAAATTCTTGCAGACTATGCTTGCTACTGTGATAAAGAAGGTATTTGGAAGTTCTCTGATTAAGGTAGGTA GTCAAAGTATCGATTTTTCAGGGGAATGGAGGGTTGTTACATTTCGTGAATTATTGATAAAAGACTGTGGTATTGATATC AATGCATATTCCAACACAGAAAGTTTATTAGATAAGATAAAGGAAGAAGGAATCGAACTGCATTCTGAAACCCCAATAGA GCAGCTAAGCAAGGGAAATCTCATTGATTTACTATACAAAAAAGTTAGCCGTCCGAAGATTATCTCCCCAACCTTTTTAA CGGAGCATCCAACATCACTGTCTCCTTTAGCTCGTGCAAATGACGACAATAAAGAAATAGTGGATCGTTTTCAATTGATA ATCAATGGGGCAGAGGTTATTAACGCGTATTCAGAGCTTGTCGACCCAGTAGAACAAAAGAAGCGTCTTATGGAACAAGC GCTGGCTAAGGCAAATGGTGATGAGGAAGCAATGACAATGGATTATGATTACATCACCGCAATGGAGTATGGTATGCCAC CAATCTCTGGTTGGGGTATGGGGGTAGACCGTTTTCTGCAAGTAATTACTGGGCAGGAGAATCTACGAGATACAGTATTA TTTCCGATTATGAGGCCATTAAATAACTAA Protein sequence : MGIQELEENRRQKLELVKEHQNPYPERYQVTHELKDAIKLLDGTKDISVAGRILSIRRMGKLCFVNIGDIYGKLQVAIRR DDVGEEAYEFFRQGFDIGDFLGVSGEIFTTQTGEKTIRAQKLTFLGKAFKPLPEKFHGITDKDSCYRQRYLDLIMNEDTR NRFLLKFQMIKEIRRYLEDSGYLEVETPVLNDKPSGATARPFISHHNALDMEVNLRIAPETYLKRCIVGGIPKVFEFARC FRNEGMDATHLQDFTMLEGYCAYYNYTDNMKFLQTMLATVIKKVFGSSLIKVGSQSIDFSGEWRVVTFRELLIKDCGIDI NAYSNTESLLDKIKEEGIELHSETPIEQLSKGNLIDLLYKKVSRPKIISPTFLTEHPTSLSPLARANDDNKEIVDRFQLI INGAEVINAYSELVDPVEQKKRLMEQALAKANGDEEAMTMDYDYITAMEYGMPPISGWGMGVDRFLQVITGQENLRDTVL FPIMRPLNN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-80 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cphy_2574 | YP_001559674.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-80 | 41 |
