Gene Information

Name : Cphy_2424 (Cphy_2424)
Accession : YP_001559524.1
Strain : Clostridium phytofermentans ISDg
Genome accession: NC_010001
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 2976818 - 2977018 bp
Length : 201 bp
Strand : +
Note : PFAM: helix-turn-helix domain protein; KEGG: cbe:Cbei_3549 transcriptional regulator, XRE family

DNA sequence :
TTGAAAAATCGTTTGGAAGAAATCAGAAAACTACACGGAATAAAACAAGAAGAGTTAGCAAATATTCTTGAAGTTTCAAG
ACAAACCATTGGCTCCTTAGAGAATGGCCGCTACAATCCTTCCATATTATTAGCATTTAAAATAGCTCGTTATTTTAATA
TGAGGATTGAAGATATTTTTATTTATGAGGATGAAGTGTGA

Protein sequence :
MKNRLEEIRKLHGIKQEELANILEVSRQTIGSLENGRYNPSILLAFKIARYFNMRIEDIFIYEDEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 2e-08 53
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 1e-08 53
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 4e-10 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cphy_2424 YP_001559524.1 XRE family transcriptional regulator VFG2175 Protein 5e-09 53
Cphy_2424 YP_001559524.1 XRE family transcriptional regulator VFG2168 Protein 5e-09 53