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Name : Cphy_2214 (Cphy_2214) Accession : YP_001559319.1 Strain : Clostridium phytofermentans ISDg Genome accession: NC_010001 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 2733925 - 2735244 bp Length : 1320 bp Strand : - Note : TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: cth:Cthe_2340 UDP-glucose/GDP-mannose dehydrogenase DNA sequence : ATGGATTTATATGAGAGATTGATTAGCGGGGATGAGAAATTAGCTGTGGTAGGGCTAGGATATGTTGGATTACCGATAGC AGTAGCTTTCGCTAAGAAAATTAAGACAATTGGATTTGATATTAACCAACAAAAGATTAGCGAGTATTTAAATGGGAAAG ATCCTACACAGGAGGTTGGAACAGAAGTAATCAGAAAAACCACTCTGGAATTCACTTGTAGCGAGGAAAAACTAAGGGAA TCTAAATTTATCATCGTAGCAGTACCAACTCCAATCCATACAGATAAAACACCGGATCTATCGCCTGTAACAGGCGCGTG TGAAATAGTCGGACGCAATCTTACAAAGGATGCAATTGTTGTATTTGAATCTACCGTTTACCCAGGGGTGACTGAGGAGG TATGTATTCCAATTCTGGAGAATATCTCAGGCCTCAGCTGTGGAACAGATTTTAAAATAGGCTATTCACCGGAACGTATC AATCCGGGGGACAAGCATCATAAATTAAATAATATCATAAAAATTGTATCCGGAATTGATACGGAAGCAAGAGAAATCAT TGCTAAGGTTTACGAATTAATCATTGATGCAGGCGTGCACCTTGTAACGAACATAAAGACAGCGGAAGCTGCGAAGCTTG TAGAGAATGCGCAGAGAGATATTAACATTGCATTTATGAATGAACTAGCTATGGTATTTGAGAAAATGGACATTAACACG CAAGAGGTCGTTGAGGCAATGAACACGAAGTGGAATGCTCTCGGTTTTACACCCGGTTTAGTAGGCGGCCACTGCATCGG TGTAGATCCATATTATTTTATTTATCAGGCAGAAAAATTAGGGTATCATTCTCAGATTATTTTATCAGGCAGAAAGATTA ACGATGGTATGGGTTCTTTTATCGGTGATATTGTAATTAAGAAGCTGATAAAGACAAACAAATTAGTGAATCAAGCAAAA ATATATATTCTTGGTATCACCTTTAAAGAAAACTGCCCCGATATTAGAAATTCTAAAGTAATTGACATTATTAACAGACT GAAAGAATATGACGTGACTGTTAATGTTGTGGATCCAGTTGCTGATGAGAAGGAAGTAAAATCATTTTATGATATAAATA TGGTGAAGCTTTCTGAGGTGAAAGAAGCAGATTGTATTATAATAGCGGTTGCACATAATGAATTTAGGAAATTATCAAAA GATGACCTGGATCAAATGTTTCGTGCATTACCAGCCGAAGAAAAGGTTGTGATTGACATAAAAAGTATTTTTCCTAAGAG TGAAATGGAGGCAATGGGATATTCCTATTGGAGCCTATAA Protein sequence : MDLYERLISGDEKLAVVGLGYVGLPIAVAFAKKIKTIGFDINQQKISEYLNGKDPTQEVGTEVIRKTTLEFTCSEEKLRE SKFIIVAVPTPIHTDKTPDLSPVTGACEIVGRNLTKDAIVVFESTVYPGVTEEVCIPILENISGLSCGTDFKIGYSPERI NPGDKHHKLNNIIKIVSGIDTEAREIIAKVYELIIDAGVHLVTNIKTAEAAKLVENAQRDINIAFMNELAMVFEKMDINT QEVVEAMNTKWNALGFTPGLVGGHCIGVDPYYFIYQAEKLGYHSQIILSGRKINDGMGSFIGDIVIKKLIKTNKLVNQAK IYILGITFKENCPDIRNSKVIDIINRLKEYDVTVNVVDPVADEKEVKSFYDINMVKLSEVKEADCIIIAVAHNEFRKLSK DDLDQMFRALPAEEKVVIDIKSIFPKSEMEAMGYSYWSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-106 | 52 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-94 | 48 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-94 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cphy_2214 | YP_001559319.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 1e-94 | 48 |
