Gene Information

Name : Cphy_1986 (Cphy_1986)
Accession : YP_001559093.1
Strain : Clostridium phytofermentans ISDg
Genome accession: NC_010001
Putative virulence/resistance : Resistance
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2452455 - 2453177 bp
Length : 723 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: amt:Amet_1691 two component transcriptional regulator, winged helix family

DNA sequence :
ATGGATACATCGTTAAGCAATAAAAAAATATTAATAATAGATGATGAAGAAGATATATTGAAGCTATTATCAATGGTACT
AAAAAAAGAAGGCTTTGAAAACATATATACAGCTGAGGATGGAGAAGGTGGATTTACATTATTTAAAAGAATTAGTCCAG
ATATAATTCTTTTGGATATTATGCTACCTGATGAAGAAGGGTATGAGGTCTGTAAAAAAATTAGAAAAAGCTCCAATGTT
CCTATTTTATTTATATCAGCTAAAACAGAAGAAATTGATAGAGTACTGGGGTTTGCATTAGGAGGAGATGACTATATAAC
AAAACCATTTAGCCCGAAAGAAGTAGCCTATAGAATAAAAGCAATTTTAAGAAGAAGTAGTTATCATGATGAAGAGGAAA
ATAAGAGTACTATATTAAATCTTGGGCCTTTTCAGATAGATGAGGAAAAAATTGAAGTCAGGAAAAATGGAGAACTAATA
GAGTTAAAACCGAAAGAATATAAAATGTTTCTATATCTGGCAAAACATCCCAACCAAATTATGAGTAAGGAAAAATTGTG
TAGCGAAGTATGGGGAGAAGATTATATTGGTTTTGATAACACTATAATGGTGCATATCAGAAAACTTAGAGAGAAAATTG
AAAAAGATCCATCGAATCCGAAGCATATTCTTAATATAAAAGGCTTAGGTTACAAATTTGTTATAAAGGATGAATCAGTA
TGA

Protein sequence :
MDTSLSNKKILIIDDEEDILKLLSMVLKKEGFENIYTAEDGEGGFTLFKRISPDIILLDIMLPDEEGYEVCKKIRKSSNV
PILFISAKTEEIDRVLGFALGGDDYITKPFSPKEVAYRIKAILRRSSYHDEEENKSTILNLGPFQIDEEKIEVRKNGELI
ELKPKEYKMFLYLAKHPNQIMSKEKLCSEVWGEDYIGFDNTIMVHIRKLREKIEKDPSNPKHILNIKGLGYKFVIKDESV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboR YP_006309915.1 SboR Not tested FWisland_1 Protein 3e-37 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cphy_1986 YP_001559093.1 two component transcriptional regulator HE999704.1.gene2815. Protein 5e-40 47
Cphy_1986 YP_001559093.1 two component transcriptional regulator NC_012469.1.7685629. Protein 2e-38 45
Cphy_1986 YP_001559093.1 two component transcriptional regulator NC_012469.1.7686381. Protein 8e-39 44
Cphy_1986 YP_001559093.1 two component transcriptional regulator FJ349556.1.orf0.gene Protein 7e-38 43
Cphy_1986 YP_001559093.1 two component transcriptional regulator NC_002952.2859905.p0 Protein 1e-41 43
Cphy_1986 YP_001559093.1 two component transcriptional regulator NC_007793.3914279.p0 Protein 1e-41 43
Cphy_1986 YP_001559093.1 two component transcriptional regulator NC_003923.1003749.p0 Protein 1e-41 43
Cphy_1986 YP_001559093.1 two component transcriptional regulator NC_007622.3794472.p0 Protein 1e-41 43
Cphy_1986 YP_001559093.1 two component transcriptional regulator NC_002745.1124361.p0 Protein 1e-41 43
Cphy_1986 YP_001559093.1 two component transcriptional regulator NC_009782.5559369.p0 Protein 1e-41 43
Cphy_1986 YP_001559093.1 two component transcriptional regulator NC_002951.3237708.p0 Protein 1e-41 43
Cphy_1986 YP_001559093.1 two component transcriptional regulator NC_002758.1121668.p0 Protein 1e-41 43
Cphy_1986 YP_001559093.1 two component transcriptional regulator NC_009641.5332272.p0 Protein 1e-41 43
Cphy_1986 YP_001559093.1 two component transcriptional regulator NC_013450.8614421.p0 Protein 1e-41 43