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Name : Cphy_1934 (Cphy_1934) Accession : YP_001559041.1 Strain : Clostridium phytofermentans ISDg Genome accession: NC_010001 Putative virulence/resistance : Unknown Product : alpha amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 2388859 - 2390790 bp Length : 1932 bp Strand : - Note : PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: csc:Csac_2428 alpha amylase, catalytic region DNA sequence : ATGTATACACTTAAAAGTAAATTACGTGACTTATACCGCCATCCTGTGGGGTATGATGTCATCAATAAAATTTTATTGCA GGCAGGTCTTTCCAAAGGGTTGATTGAAAATCCTGTCATCGGTGCTTTACCTCTTTCCTTCCTCAATCGTATTGCAGGAA AAAAACTAGGAAATGGCTTCTTTGATGCATTACTTGCCCTGTTAAATCAATCCAACGACAGGCTTGATCCATACTCATCT AAGGATAAGAAAATTACTCCTACTTGGTGGAAGGAAGCTGTGTTTTATCAGATTTATCCTCGCAGTTTCATGGATGGAAA TGGTGATGGTGTCGGAGATCTTCCCGGTATTATTTCGAAATTAGATTACTTAAAGGAGCTTGGCGTGGATGCCCTCTGGC TCTCTCCTATCTATGATTCTCCAGGAGATGACAATGGATATGATATTAGAGATTACCAAAAGATTGATTCACAATTCGGT ACCATGGAAGATTTTGATCTCCTGCTTACGGAACTTCATGCACGCAATATGCGTTTAGTCATGGATTTGGTGGTAAATCA TACTTCCGATGAACATCACTGGTTTAAAGAAGCGTTGAAATCTTCAGAATCTACTTACCGAGATTATTATTTTCTAAGAA AAGAACCGAACAACTGGACTTCTTTTTTTAGCGGTAGTGCTTGGAACCACTATCCTGAGGAAGATCTCTGGGGACTACAT CTATTTTCCAAAAAGCAAATGGATCTAAATTGGGAGAATCCAAAGCTTAGACAAGATATCTATCAAATGATTCGTTGGTG GTTAGAAAAAGGGGTAGATGGCTTTCGCCTGGATGTAATCAACTATATTTCTAAGGAGACTGGACTACCGGATGGTGATT CCTTCATCGGAAATCTGATGGGATTTACAGGAATTGAACATTATTTTTATGGACCAAAGCTTCATAACCATTTGCAGGAA ATACAGAAAGAGGCTTTCACACCTTATCAGGCTTTTTCTGTGGGAGAAACTCCTGGTATCGGAATGAAGATGGGAAAACT TCTTACAGACGATAGCCGTGGTGAGCTTAATATGATGTTTTCCTTTGATCATCTAGAAACCAGCGGACATGCTCGATTTG ATCAATATGAGTATGATTTAAATTATTATAAATCTTATATTATGGACTGGATGGAAAATTTCGCGGATACCTCATGGATG TCGCTTTTTTATGATAACCATGACAACCCTCGAATGCTTTCTAAAGTTGACCATACCCATACACATCGCCAGGAGCTTGC AAAGATGTTAGCCATGATTCAGATGACGTTAAAAGGTACTCCTTTTTTGTATCAGGGGCAAGAACTTGGAATGATTAATA AAGATTTCCACGAGATTAGCAATTTTCGAGATGTAGAAAGTATTAATAAATATAAGGAACTCTGTGAAAAAATGCCAAAA GAAGAAGCTTTTCTTCAAATCCTTGCAGGAAGTCGTGACCATGCCCGTACACCTATGCAGTGGTCAGCGAAACCTGGGTG TGGTTTCTCAAATGCAGTACCTTGGATTGACAGTGACGGCGATGAATTAGTGTGTAATGCTGAGATTCAGATGCAGGATT CAGAGTCTGTTTTATCTTTTTATCGGGATTTGATTGCACTCAGGAGAAAAACACCAGCATTGATTTATGGAGATATTGAA TTCACGCATAAGAAGCGGAAGGATATTTTGATCTATACTCGTTACCTAGAGGGTGAAACTTACCTGATTATCTGTAATTT GAGTAATGATGAGCAGAAACTTCCGGGAAATGTACCTGTTTCGGAAAGTTTAGAAGGTTTGGAAAGTTTATCTGCTTCTG CCGACGAAAGAAAGGGCTTAGTACTCTGCAATTATCCAGCGAAAGTCATGAAATCTCTTCGTGCTTATGAGGGTAGGGTT TATCGTATTTAG Protein sequence : MYTLKSKLRDLYRHPVGYDVINKILLQAGLSKGLIENPVIGALPLSFLNRIAGKKLGNGFFDALLALLNQSNDRLDPYSS KDKKITPTWWKEAVFYQIYPRSFMDGNGDGVGDLPGIISKLDYLKELGVDALWLSPIYDSPGDDNGYDIRDYQKIDSQFG TMEDFDLLLTELHARNMRLVMDLVVNHTSDEHHWFKEALKSSESTYRDYYFLRKEPNNWTSFFSGSAWNHYPEEDLWGLH LFSKKQMDLNWENPKLRQDIYQMIRWWLEKGVDGFRLDVINYISKETGLPDGDSFIGNLMGFTGIEHYFYGPKLHNHLQE IQKEAFTPYQAFSVGETPGIGMKMGKLLTDDSRGELNMMFSFDHLETSGHARFDQYEYDLNYYKSYIMDWMENFADTSWM SLFYDNHDNPRMLSKVDHTHTHRQELAKMLAMIQMTLKGTPFLYQGQELGMINKDFHEISNFRDVESINKYKELCEKMPK EEAFLQILAGSRDHARTPMQWSAKPGCGFSNAVPWIDSDGDELVCNAEIQMQDSESVLSFYRDLIALRRKTPALIYGDIE FTHKKRKDILIYTRYLEGETYLIICNLSNDEQKLPGNVPVSESLEGLESLSASADERKGLVLCNYPAKVMKSLRAYEGRV YRI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 8e-104 | 41 |
