Gene Information

Name : Cphy_1676 (Cphy_1676)
Accession : YP_001558787.1
Strain : Clostridium phytofermentans ISDg
Genome accession: NC_010001
Putative virulence/resistance : Resistance
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2056682 - 2057341 bp
Length : 660 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC1506 response regulator (CheY-like receiver domain and a HTH)

DNA sequence : 
TTGCTGAATATTTTGATTGTAGAAGACGAGCAGGCAATCAATGAATTAATTTATTTAAATTTGAGCGATGAAGGATACCG
CTGCACGCGTGCCTATGACGGGGAAGAAGCGGCCAACCTCATAGAAAATTATAACTATGACCTGATTTTACTGGACATCA
TGCTACCGAAAATCAATGGATATGAATTATTTGATTATATACACCCATTGGGTACACCTGTAATTTTTATCACCGCCAAA
AGCGATATCAATGATCGAATCCGGGGGTTGAGACTTGGGGCTGATGATTATATTTCCAAACCGTTTCAGGTGGGAGAACT
GCTAGCACGTGTGGAGGCAGTCATTAGGCGTTTTGGAAAAAGCGAAAGAAAAATTGAGCTGTATGGCGTAACGATTGATT
TAAATTCCCGTGAGGTACGAAAAGACGGCCAACTAATTGAGCTGACCGTGAAAGAGTTTGAATTGCTGATTCAGTTAATT
CAAAATAAAAATGTAGCGCTTCGACGCAGTTGGCTATATGAGCGGGTGTGGGAAGGTGAATTCACAGGCGAGACACGGAC
GCTTGATACACATATCCAGCGTCTGCGGAAAAAGTTGGAATGGGAAGATCGTATCAAGACAGTATTCCGAATTGGCTATC
GGCTTGAGGTATTGAAATGA

Protein sequence : 
MLNILIVEDEQAINELIYLNLSDEGYRCTRAYDGEEAANLIENYNYDLILLDIMLPKINGYELFDYIHPLGTPVIFITAK
SDINDRIRGLRLGADDYISKPFQVGELLARVEAVIRRFGKSERKIELYGVTIDLNSREVRKDGQLIELTVKEFELLIQLI
QNKNVALRRSWLYERVWEGEFTGETRTLDTHIQRLRKKLEWEDRIKTVFRIGYRLEVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 5e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cphy_1676 YP_001558787.1 two component transcriptional regulator NC_003923.1003417.p0 Protein 1e-30 44
Cphy_1676 YP_001558787.1 two component transcriptional regulator NC_013450.8614146.p0 Protein 1e-30 44
Cphy_1676 YP_001558787.1 two component transcriptional regulator NC_002951.3238224.p0 Protein 1e-30 44
Cphy_1676 YP_001558787.1 two component transcriptional regulator NC_007793.3914065.p0 Protein 1e-30 44
Cphy_1676 YP_001558787.1 two component transcriptional regulator NC_002758.1121390.p0 Protein 1e-30 44
Cphy_1676 YP_001558787.1 two component transcriptional regulator NC_010079.5776364.p0 Protein 1e-30 44
Cphy_1676 YP_001558787.1 two component transcriptional regulator NC_002952.2859858.p0 Protein 1e-30 44
Cphy_1676 YP_001558787.1 two component transcriptional regulator NC_007622.3794948.p0 Protein 1e-30 44
Cphy_1676 YP_001558787.1 two component transcriptional regulator AE015929.1.gene1106. Protein 2e-23 42
Cphy_1676 YP_001558787.1 two component transcriptional regulator NC_003923.1003749.p0 Protein 2e-30 42
Cphy_1676 YP_001558787.1 two component transcriptional regulator AF310956.2.orf0.gene Protein 2e-28 41
Cphy_1676 YP_001558787.1 two component transcriptional regulator NC_002952.2859905.p0 Protein 1e-30 41
Cphy_1676 YP_001558787.1 two component transcriptional regulator NC_002745.1124361.p0 Protein 1e-30 41
Cphy_1676 YP_001558787.1 two component transcriptional regulator NC_009782.5559369.p0 Protein 1e-30 41
Cphy_1676 YP_001558787.1 two component transcriptional regulator NC_002951.3237708.p0 Protein 1e-30 41
Cphy_1676 YP_001558787.1 two component transcriptional regulator NC_007622.3794472.p0 Protein 1e-30 41
Cphy_1676 YP_001558787.1 two component transcriptional regulator NC_002758.1121668.p0 Protein 1e-30 41
Cphy_1676 YP_001558787.1 two component transcriptional regulator NC_009641.5332272.p0 Protein 1e-30 41
Cphy_1676 YP_001558787.1 two component transcriptional regulator NC_013450.8614421.p0 Protein 1e-30 41
Cphy_1676 YP_001558787.1 two component transcriptional regulator NC_007793.3914279.p0 Protein 1e-30 41