Gene Information

Name : Cphy_1620 (Cphy_1620)
Accession : YP_001558731.1
Strain : Clostridium phytofermentans ISDg
Genome accession: NC_010001
Putative virulence/resistance : Resistance
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1998403 - 1999086 bp
Length : 684 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ckl:CKL_3005 predicted transcriptional regulator

DNA sequence : 
ATGAGAATATTATTGATTGAAGATGAAAAATACATGGCAGAAGCTGTGGCGCAGGTTTTACGCAAGAACAATTATACTGT
CGATTTAGCCCATGATGGTGAGTATGGGCTTGATTGTGCGTTGTCAGCTATCTACGATATCATTATACTTGATATCATGT
TGCCTAAAATGAATGGGTTGGATGTTCTAAAGTCTTTACGTAGAGAAAAAATTGCCACTCCTGTAATACTACTATCCGCC
AAAGGGGAAACCGAAGACAAGGTAAGAGGACTGGATACCGGTGCGGATGATTATCTACCAAAGCCATTTAAAACCGAAGA
GCTTCTTGCTCGTTTGCGTGCGTTAGGGCGCAGAAAGGGTGAAATTATTCCGGAAGGTATATTGTCTTATGGTGATATAG
AACTTAATCCCAATACGCTGGATGTGTATTGTGGTAAAAAAACATACAAATTAACCCTAAAAGAAAGCCAGCTTTTAGAA
TTACTTATGAACATGAAAGGTATGGTTATCTCAAAAAATTACATTATCGAAAAGCTGTGGGGCTTTGATGGTGAAGCAGA
AGATAACCATGTGGAGGTATACATCTCTTTTCTGCGTAAAAAACTGGCTGCACTAGGTTCAACGAATACAATTCAAACTA
TACGAGGTCTTGGATACATGTTAAAAATGGTAAAGGAAGAATAA

Protein sequence : 
MRILLIEDEKYMAEAVAQVLRKNNYTVDLAHDGEYGLDCALSAIYDIIILDIMLPKMNGLDVLKSLRREKIATPVILLSA
KGETEDKVRGLDTGADDYLPKPFKTEELLARLRALGRRKGEIIPEGILSYGDIELNPNTLDVYCGKKTYKLTLKESQLLE
LLMNMKGMVISKNYIIEKLWGFDGEAEDNHVEVYISFLRKKLAALGSTNTIQTIRGLGYMLKMVKEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cphy_1620 YP_001558731.1 two component transcriptional regulator NC_003923.1003417.p0 Protein 8e-28 43
Cphy_1620 YP_001558731.1 two component transcriptional regulator NC_013450.8614146.p0 Protein 8e-28 43
Cphy_1620 YP_001558731.1 two component transcriptional regulator NC_002951.3238224.p0 Protein 8e-28 43
Cphy_1620 YP_001558731.1 two component transcriptional regulator NC_007793.3914065.p0 Protein 8e-28 43
Cphy_1620 YP_001558731.1 two component transcriptional regulator NC_002758.1121390.p0 Protein 8e-28 43
Cphy_1620 YP_001558731.1 two component transcriptional regulator NC_010079.5776364.p0 Protein 8e-28 43
Cphy_1620 YP_001558731.1 two component transcriptional regulator NC_002952.2859858.p0 Protein 8e-28 43
Cphy_1620 YP_001558731.1 two component transcriptional regulator NC_007622.3794948.p0 Protein 8e-28 43
Cphy_1620 YP_001558731.1 two component transcriptional regulator AE015929.1.gene1106. Protein 3e-26 43
Cphy_1620 YP_001558731.1 two component transcriptional regulator BAC0125 Protein 1e-24 41