Gene Information

Name : Cphy_1228 (Cphy_1228)
Accession : YP_001558345.1
Strain : Clostridium phytofermentans ISDg
Genome accession: NC_010001
Putative virulence/resistance : Unknown
Product : pyridoxal-5'-phosphate-dependent protein beta subunit
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0031
EC number : -
Position : 1551030 - 1551938 bp
Length : 909 bp
Strand : +
Note : PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cth:Cthe_1560 pyridoxal-5'-phosphate-dependent enzyme, beta subunit

DNA sequence : 
ATGTTATATGATAATATGCAGGAGTTAATCGGGAATACGCCCCTTGTGAAATTAAATTATGTAGGGGTTCCAAAGGAAGT
GAATTTATATGCAAAGCTAGAATATTGGAACCCTTCCGGAAGTGTAAAGGATAGAACCGGGCTTTATATGATAAAGGATG
CAGAAGAAAAAGGGTTATTAAGAAGAGGAGCAACAATCATTGAGGCAACTGCGGGGAATACAGGCTTAGGAATTGCTATG
GCAGCCTTAAACCGTGGATACCGGGTTATCTTTGTTGTGCCTACGAAATTTTCTGTAGAAAAACAAACCTTATTACGCGC
TCTAGGTGCAGAGATTATCAATACACCACGTGAGGAAGGAATGCAAGGTGCGAATCATAAGGCATCAGAACTGTTAAATG
AAATTCCGGGTTCGATATCTCTTCGTCAGTTTGATAACCTTGCAAATCCCAAAGCGCATTATGAAACGACAGGTAAAGAA
ATATATCAAGATTTAGGGGACTCGATTCATTACTTTATTGCAGGTGCAGGCAGCGGTGGCACCTATTCTGGAATCGTTAA
GTATTTAAAGGAGAGAAATCCTAAGATACAAGGTATATTAGCTGACCCTGTTGGATCTACCATGGGAGGCGGAGAACATG
CTGATTATGATATTGAGGGGATTGGAAACGATTTTATTGCAGGAACAATGGATATGAGTTTAGTGGATGATGTTGTAAAG
ATAACGGATACGGAAGCATTTGAAGGGGCGAGACTGCTGGCATTAAAAGAGGGAATAATTGCAGGGTCATCCTCTGGTGC
AGCTTTGGCAGCAGTAATAAAATTAGCAGAGAAAGTTAAAAAAGGAAACATTGTAACCCTATTTCCGGATCGAGGGGATA
GATACTTCAGTAAAAATTTATACTTATAA

Protein sequence : 
MLYDNMQELIGNTPLVKLNYVGVPKEVNLYAKLEYWNPSGSVKDRTGLYMIKDAEEKGLLRRGATIIEATAGNTGLGIAM
AALNRGYRVIFVVPTKFSVEKQTLLRALGAEIINTPREEGMQGANHKASELLNEIPGSISLRQFDNLANPKAHYETTGKE
IYQDLGDSIHYFIAGAGSGGTYSGIVKYLKERNPKIQGILADPVGSTMGGGEHADYDIEGIGNDFIAGTMDMSLVDDVVK
ITDTEAFEGARLLALKEGIIAGSSSGAALAAVIKLAEKVKKGNIVTLFPDRGDRYFSKNLYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0459 YP_039908.1 pyridoxal-phosphate dependent protein Not tested vSa¥á Protein 2e-41 44
SAS0417 YP_042544.1 pyridoxal-phosphate dependent protein Not tested vSa¥á Protein 8e-42 43