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Name : Cphy_1219 (Cphy_1219) Accession : YP_001558336.1 Strain : Clostridium phytofermentans ISDg Genome accession: NC_010001 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 1538568 - 1539884 bp Length : 1317 bp Strand : + Note : KEGG: amt:Amet_3796 xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel DNA sequence : ATGAAAAATTACTTTCCAAATGTTCCAGAAGTAAAATACGAAGGCCCAAATTCAACGAATCCATTTGCTTTTAAATATTA TGACGCAAATAAAGTTGTAGCGGGTAAAACAATGAAAGAGCACTGTCGTTTTGCATTATCTTGGTGGCATACTCTTTGTG CAGGTGGTGCTGATCCATTCGGTGTAACAACTATGGATAGAACCTACGGAAATATCACAGATCCAATGGAACTTGCTAAG GCAAAAGTTGACGCTGGTTTCGAATTAATGACTAAATTAGGAATTGAATTCTTCTGTTTCCATGACGCAGATATTGCTCC AGAAGGTGATACTTTTGAAGAGTCAAAGAAGAATCTTTTTGAAATCGTTGATTACATCAAAGAGAAGATGGATCAGACTG GTATCAAGTTATTATGGGGTACTGCTAATAACTTTAGTCATCCAAGATTTATGCATGGTGCTTCCACATCTTGCAACGCA GACGTATTTGCATATGCTGCTGCTAAGATTAAGAATGCATTAGATGCAACAATTAAATTAGGCGGTAAAGGTTATGTATT CTGGGGTGGTCGTGAAGGTTATGAAACACTTCTTAATACAGATTTAGGACTTGAGCTTGATAATATGGCTAGACTTATGA AGATGGCTGTAGAGTATGGCCGTGCAAATGGTTTTGATGGCGACTTCTATATTGAGCCAAAGCCAAAGGAACCAACCAAG CATCAATATGATTTTGATACAGCAACCGTACTTGCTTTCCTTCGCAAATATGGCTTAGAAAAAGATTTCAAGATGAACAT TGAAGCAAACCATGCTACTCTTGCAGGTCATACCTTTGAACATGAACTTGCAATGGCTAGAGTTAATGGTGCATTTGGTT CTGTAGATGCAAACCAGGGTGATCCAAACCTTGGATGGGATACGGATCAATTCCCAACTGATGTTCATAGTGCAACTCTT GCAATGCTTGAAGTACTTAAGGCTGGTGGATTCACTAACGGCGGACTTAACTTTGATGCAAAGGTAAGACGTGGTTCCTT CGAATTTGATGATATTGCATACGGTTATATTGCAGGAATGGATACTTTTGCACTTGGTTTAATTAAGGCTGCTGAGATTA TCGACGATGGTAGAATCGCAAAATTTGTAGATGATCGTTATGCAAGCTATAAAACAGGAATTGGTAAAGCAATTGTGGAT GGAACTACATCTCTTGAAGAATTAGAGCAGTATGTTTTAACACATAGTGAACCAGTAATGCAGAGTGGTCGTCAGGAAGT TCTTGAAACAATCGTAAATAATATTTTATTTAGATAA Protein sequence : MKNYFPNVPEVKYEGPNSTNPFAFKYYDANKVVAGKTMKEHCRFALSWWHTLCAGGADPFGVTTMDRTYGNITDPMELAK AKVDAGFELMTKLGIEFFCFHDADIAPEGDTFEESKKNLFEIVDYIKEKMDQTGIKLLWGTANNFSHPRFMHGASTSCNA DVFAYAAAKIKNALDATIKLGGKGYVFWGGREGYETLLNTDLGLELDNMARLMKMAVEYGRANGFDGDFYIEPKPKEPTK HQYDFDTATVLAFLRKYGLEKDFKMNIEANHATLAGHTFEHELAMARVNGAFGSVDANQGDPNLGWDTDQFPTDVHSATL AMLEVLKAGGFTNGGLNFDAKVRRGSFEFDDIAYGYIAGMDTFALGLIKAAEIIDDGRIAKFVDDRYASYKTGIGKAIVD GTTSLEELEQYVLTHSEPVMQSGRQEVLETIVNNILFR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 3e-117 | 57 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 2e-117 | 57 |
