|
Name : Cphy_1000 (Cphy_1000) Accession : YP_001558119.1 Strain : Clostridium phytofermentans ISDg Genome accession: NC_010001 Putative virulence/resistance : Unknown Product : C4-dicarboxylate anaerobic carrier Function : - COG functional category : S : Function unknown COG ID : COG1288 EC number : - Position : 1264310 - 1265803 bp Length : 1494 bp Strand : + Note : PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: cpf:CPF_1242 dicarboxylate transporter DNA sequence : ATGAAGAAAAAAATCACATTTCCAACTGCTTATACCATCCTTTTTATTGTTTTGATATTGGGGGCAGCATTAACTTATTT TGTTAATGCGGGTTCTTATGCAAAATTGACTTACGATTTAGAAACTGATAGTTTTATTGAAACATTTCCAGATGGGACAA AGCAGACTTTAGAAGGAACCCAAGAAACTTTGAATCAGTTAGGAATAGTAAATGATATTGCTAAATTTAAAGAAGGAAGT ATTAATAAACCGATATCAATACCCGGGACATATGAAAGATTAGATTCAAATCCGCAAGGAGTAGTGGATGTATTATTAGC TCCAATTAAAGGAGTATATGACAGTATAGGAATTATCTTGTTCGTGTTAATCATAGGCGGTGTCATCGGTGTAGTTAACG AAAGTGGCTCTATTAATGCAGGAATTGCTGCGCTATCACGAGTGACGAAAGGTCATGAATATCTACTGATCGTATTTGTA ACATTCTTAATTACACTTGGAGGTACTACGTTTGGGCTGGCGGAAGAGACAATAGCCTTTTATCCGATATTAATGCCCGT ATATTTAGCAGCAGGATATGATGCCATCGTTTGTATTGCAGCGATTTATATGGGTTCCGCAATTGGTTCTATGTTTTCAA CTACGAATCCGTTTTCTGTTGTAATTGGTTCCAATGCAGCAGGTATCAACTTTACTCAAGGGATATCTTACCGAGTTATC GGCTTAATCATTGGGTTCCTTGTTACGACATGGTATATTGTACGATACGCTACAAGAATAAAAAAGAGTCCCGATAAATC TCTTGTTTATGAAATGCGAGAAGATATAAACAAAAATTTCAGTAAGCAGAAGGAAGAAGAATTTACAACTAGAAGAGTTT GGATATTATCTATTTTTGCACTCAGCTTCGTTGTTATGATTTATGGTGTTTCTAAACTTGGCTGGTGGTTTGAAGAAATG ACAGCGCTCTTTTTAGTATCGGGAATTTTGATTGGAATTATTGCAGGGATTGGGGAGAAAGTTTTTGTCAACACGTTTGT CAGTGGAGCAGCTGATCTAGTTGGTGTTGGCCTTGTTATTGGTATTGCAAGAAGTATTAATATTATTTTGGAAAATGGTC TCGTATCAGACTCAATTTTATATAGTTTATCGAATCTCGTTTCTGGTATGAGTCCAAATATTTTCGTAATTCTAATGATG GTAGTGTTTTTAATCTTAGGCTTTTTTATTTCTTCCTCCTCTGGACTTGCTACACTAGCCATTCCTATTATGGCTCCACT TGCAGATGCTGTTGGTGTTCCAAAGGATGTGATTATTACAGCTTATATATTTGGCCAAGGGTTAATGGCTTTTATTACAC CGACTGGGCTTATCTTGGCAAGTCTTGAGATGGTAAATGTAACGTATAATAAGTGGCTTAAATTTATTATGCCTTTATTA GGGATGATTGCAGTTGTGGCAGTAGCGATTTTATTGTTAGAAGTAAATCTATAA Protein sequence : MKKKITFPTAYTILFIVLILGAALTYFVNAGSYAKLTYDLETDSFIETFPDGTKQTLEGTQETLNQLGIVNDIAKFKEGS INKPISIPGTYERLDSNPQGVVDVLLAPIKGVYDSIGIILFVLIIGGVIGVVNESGSINAGIAALSRVTKGHEYLLIVFV TFLITLGGTTFGLAEETIAFYPILMPVYLAAGYDAIVCIAAIYMGSAIGSMFSTTNPFSVVIGSNAAGINFTQGISYRVI GLIIGFLVTTWYIVRYATRIKKSPDKSLVYEMREDINKNFSKQKEEEFTTRRVWILSIFALSFVVMIYGVSKLGWWFEEM TALFLVSGILIGIIAGIGEKVFVNTFVSGAADLVGVGLVIGIARSINIILENGLVSDSILYSLSNLVSGMSPNIFVILMM VVFLILGFFISSSSGLATLAIPIMAPLADAVGVPKDVIITAYIFGQGLMAFITPTGLILASLEMVNVTYNKWLKFIMPLL GMIAVVAVAILLLEVNL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SACOL1183 | YP_186046.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 4e-83 | 45 |
| SAUSA300_1064 | YP_493762.1 | TRAP family protein | Not tested | vSa¥ã | Protein | 4e-83 | 45 |
| MW1052 | NP_645869.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 3e-83 | 45 |
| SAKOR_01092 | YP_008491280.1 | Arginine/ornithine antiporter | Not tested | vSa¥ã | Protein | 1e-83 | 45 |
| SAV1171 | NP_371695.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 1e-82 | 45 |
| SA1014 | NP_374287.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 1e-82 | 45 |
