Gene Information

Name : Cphy_0958 (Cphy_0958)
Accession : YP_001558079.1
Strain : Clostridium phytofermentans ISDg
Genome accession: NC_010001
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1223811 - 1225289 bp
Length : 1479 bp
Strand : +
Note : PFAM: Aldehyde Dehydrogenase_; KEGG: cbe:Cbei_0729 aldehyde dehydrogenase

DNA sequence :
ATGAATATACAATTACAAAACAAATATAAATTATATATCAATGGTGAATGGAAAGATGCATCGGACGGTGCGACTATTAA
AACTTACAATCCTTCGAATGGAGAATTTTTAGCTGAAATCGCAGATGCTACTAATAATGATGTTGATGAAGCGATTGCAG
CTGCTAGAGAAGCTTTTAAAACATGGGGCAAAACAACTCCTGTTGAAAGAGCTGCCGTATTGAATAAGATAGCAGACATC
ATCGATGAAAATGCTGAATTTTTAGCAACAGTTGAAACTATGGATAATGGAAAACCAATTAGAGAAACAACTGGTGCAGA
TATTCCTTTAGCAGCAGATCATTTTAGATATTTTGCAGGGGTTATTAGAGCAGAAGAGGGTACCTCTACTATGATAGATG
AAAATACTCTCAACTTAATTCTCAGAGAGCCAATCGGCGTGGTTGGTCAAATTGTTCCATGGAACTTCCCATTTTTAATG
GCAGCTTGGAAGTTAGCTCCAGTACTTGCAGCAGGTGATGTTAGTGTATTTAAACCATCTAGTACAACCTCACTTAGCGT
ATTGGAATTAATGAGATTAATTGAAAATGTTGTACCAAAAGGAGTAATTAACATTGTCACTGGTAAAGGTTCTAAGAGCG
GTGAATATTTACAACATCACAAAGGACTCGATAAGCTAGCATTTACTGGTTCCACAGAAGTCGGTAGAGAAGTTGGAATT
TCCGCTGCACAGAATCTGATACCTTCCACACTCGAACTTGGCGGTAAGTCCGCAAACATTTTCTTTAGTGATGCAGATAT
GGATATTGCGTTAGAAGGTATCCAATTAGGTATCTTATTTAACCAAGGACAAGTTTGCTCCGCAGGATCAAGAATTTTTG
TTCAAGAAGATTTCTACGACGAATTTATAGAAAAAGCAATTGCTGCTTTTGAAAAAGTAAAAGTAGGAAATCCACTGGAT
CCAACAACACAGATGGGTGCTCAAGTAAGTGAGCAACAATTAAAGAAGATTTTAAGCTATGTTGAGATCGGTAAAAATGA
AGGTGCAAAAGTTGCAACAGGTGGCGAACGATTCGTAGAAGGTGACGCTGTCAACGGTTACTTTATGAAACCTACTTTAT
TAGTAAATGTAACAAACGATATGAGAGTTGCTAGAGAGGAAATCTTTGGACCAGTAGGTGTTGTTATTAAATTTAAGACT
ATCGATGAAGTGATTGACATGGCAAACGATAGTGATTATGGTTTAGCTGGTGGTGTATTTACAAAAGATATTAATAAGGC
AATTAAAGTTGCTAGAGGTATTAGAACTGGACGTATCTGGGTAAATACCTATAATATCTTCCCAGCTGGAGCATCATTTG
GTGGTTATAAAGATTCTGGTATTGGTAGAGAAACACACAAGGTAATACTCGATCATTATAGTCAAATGAAGAATATTATT
ATAAATCTAGCTGAAAAGCCAGGTGGAATGTATAGATAA

Protein sequence :
MNIQLQNKYKLYINGEWKDASDGATIKTYNPSNGEFLAEIADATNNDVDEAIAAAREAFKTWGKTTPVERAAVLNKIADI
IDENAEFLATVETMDNGKPIRETTGADIPLAADHFRYFAGVIRAEEGTSTMIDENTLNLILREPIGVVGQIVPWNFPFLM
AAWKLAPVLAAGDVSVFKPSSTTSLSVLELMRLIENVVPKGVINIVTGKGSKSGEYLQHHKGLDKLAFTGSTEVGREVGI
SAAQNLIPSTLELGGKSANIFFSDADMDIALEGIQLGILFNQGQVCSAGSRIFVQEDFYDEFIEKAIAAFEKVKVGNPLD
PTTQMGAQVSEQQLKKILSYVEIGKNEGAKVATGGERFVEGDAVNGYFMKPTLLVNVTNDMRVAREEIFGPVGVVIKFKT
IDEVIDMANDSDYGLAGGVFTKDINKAIKVARGIRTGRIWVNTYNIFPAGASFGGYKDSGIGRETHKVILDHYSQMKNII
INLAEKPGGMYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-113 52
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 9e-118 50
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 9e-118 50
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 9e-118 50
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-117 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cphy_0958 YP_001558079.1 aldehyde dehydrogenase VFG0082 Protein 3e-113 52