Gene Information

Name : Sbal195_0467 (Sbal195_0467)
Accession : YP_001552907.1
Strain : Shewanella baltica OS195
Genome accession: NC_009997
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 535298 - 535900 bp
Length : 603 bp
Strand : -
Note : PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: spc:Sputcn32_0534 response regulator receiver protein

DNA sequence : 
ATGTCTATAAAACTGCCGCTGTATTTAGTTGATGACGATGAAGCGATTCTGGATTCGCTGGGTTTTATGCTTGGGCAATT
TGGCTACCAAGTGCAAACCTTCAACAGCGGCCGCGACTTCCTTGCGCACTGCGCATTATCGCAGGCAGGCTGCGTGATTT
TAGATAGCCGAATGCCAGAGATCACCGGCCAAGAAGTACAGCAAAAACTGCTCGAAACCCACAGTCCGCTTGGCGTCATC
TTTCTCACTGGCCACGGCGACTTACCTATGGCGCTGAGCGCCTTTCGTAAGGGAGCCTGCGACTTTTTTCAAAAACCTGT
GTCCGGCAAGGCATTAGTACAAGCGATAGAAAAAGCACAGCGTGAAAGCCAGGCGGCCTTCGAGCAGCAAAGTCTGCAAC
ATAAGTTTGACCAACTGACCGAGCGCGAACAGCAAGTGTTAGCCCATGTGATCCAAGGCATGACCAATAAGCAAATCTCG
GAGGCGATGTTTTTATCCCTGCGCACAATTGAAGTACACCGCGCAAAAATCATGAAAAAACTCGAAGTGAATAATATGGC
AGAGTTAGTGCAGCACTTAGGGAATCTACATTCAGCCTTATAA

Protein sequence : 
MSIKLPLYLVDDDEAILDSLGFMLGQFGYQVQTFNSGRDFLAHCALSQAGCVILDSRMPEITGQEVQQKLLETHSPLGVI
FLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAQRESQAAFEQQSLQHKFDQLTEREQQVLAHVIQGMTNKQIS
EAMFLSLRTIEVHRAKIMKKLEVNNMAELVQHLGNLHSAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 4e-36 43
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 4e-36 43
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 4e-36 43
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 3e-36 43
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 4e-36 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal195_0467 YP_001552907.1 two component LuxR family transcriptional regulator VFG0488 Protein 1e-36 43