Gene Information

Name : Sbal195_4468 (Sbal195_4468)
Accession : YP_001556885.1
Strain : Shewanella baltica OS195
Genome accession: NC_009997
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 5278373 - 5279536 bp
Length : 1164 bp
Strand : +
Note : TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: shw:Sputw3181_0063 UDP-glucose/GDP-mannose dehydrogenase

DNA sequence : 
ATGGATATTGTTGTTGTGGGGATGGGCTATGTTGGCCTATCAAATGCAGTCTTATTGGCGCAGCAAAATCGAGTTACTGC
AATTGATTTAGTTCCTGAACGTGTCAAGCAAGTTAACGAGCGTAAATCCACTGTGGTCGATGAATTAATCGAAGATTACC
TGCAAAACAAACCGTTGAATTTAACTGCGACAACGGAAAATGTAGCCTTTCAATCGGCTGACTTTGTGATTATTGCGACT
CCAACAGACTACGATCCTCAGACTAATTATTTTAATACCCATTCGGTTGAAAGCGTCATTCGTGATGTACTCGCAGTTAA
TCCTGATACGACGATTATCATCAAATCGACTGTACCCGTCGGCTATACCACTGCATTAAGGCACAAGTTTAAGAGCGACA
ACATACTCTTTTCTCCAGAGTTTTTACGCGAAGGGAAAGCCTTGCATGACAACCTTCATCCCTCACGGATCGTCGTCGGT
GAACGCTCGGCGCGTGCCCAAGTCTTTGCAGACCTTTTAGCCAAGGCGGCAATCAAGCAAGATATTCCTATTTTGCTGAC
CGATAGCACCGAAGCCGAAGCGATTAAGTTATTTGCTAATACATTTCTCGCCATGCGGGTCGCCTACTTTAACGAACTCG
ATACCTATGCAGAGAGTCGAGGATTAAATACTCGCCAGATTATTGAGGGGGTTAGCCTCGATCCGCGTATTGGTGATTAT
TACAACAATCCTTCTTTTGGCTATGGCGGGTACTGTCTTCCGAAAGACACTAAGCAATTACTGGCTAACTACAATGATGT
CCCAAACAATTTAATCAGTGCCATTGTCGACTCAAACACCACACGAAAAGACTTTATCGCCGACGCTATTATCCGTAAGC
AGCCAAAATGTGTAGGAATTTATCGTTTGATCATGAAAGCCGATTCAGACAATTTCCGCGCCTCAGCAGTGCAAGGCGTG
ATGAAGCGCATTAAAGCGAAAGGCATTGAAGTCGTCGTGTTTGAGCCTGTACTTAAAGAAGATTACTTTTTCAAATCTCG
CGTGATGAGAGACTTAACTGAATTTAAGTCAATATGTGATGTGATCGTCTCCAACCGTATGGTTGATGAACTCAATGATG
TTGCGGATAAAGTCTATACCCGAGATCTATTTCACCATGATTAA

Protein sequence : 
MDIVVVGMGYVGLSNAVLLAQQNRVTAIDLVPERVKQVNERKSTVVDELIEDYLQNKPLNLTATTENVAFQSADFVIIAT
PTDYDPQTNYFNTHSVESVIRDVLAVNPDTTIIIKSTVPVGYTTALRHKFKSDNILFSPEFLREGKALHDNLHPSRIVVG
ERSARAQVFADLLAKAAIKQDIPILLTDSTEAEAIKLFANTFLAMRVAYFNELDTYAESRGLNTRQIIEGVSLDPRIGDY
YNNPSFGYGGYCLPKDTKQLLANYNDVPNNLISAIVDSNTTRKDFIADAIIRKQPKCVGIYRLIMKADSDNFRASAVQGV
MKRIKAKGIEVVVFEPVLKEDYFFKSRVMRDLTEFKSICDVIVSNRMVDELNDVADKVYTRDLFHHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 7e-91 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal195_4468 YP_001556885.1 UDP-glucose/GDP-mannose dehydrogenase VFG0963 Protein 1e-98 55