Gene Information

Name : Sbal195_4334 (Sbal195_4334)
Accession : YP_001556752.1
Strain : Shewanella baltica OS195
Genome accession: NC_009997
Putative virulence/resistance : Unknown
Product : RNA-binding S1 domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 5118357 - 5120720 bp
Length : 2364 bp
Strand : -
Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: spc:Sputcn32_3804 RNA binding S1 domain protein

DNA sequence :
ATGCAAACTAATGCACATAACATCGCTCAGATTATCGCTCAAGAACTGAATGTTCGTGAGCAACAAGTTGCCGCAACCAT
CACTCTGCTTGACGATGGTGCGACAGTTCCCTTCGTTGCCCGTTATCGTAAAGAAGCCACGGGCGGATTAGACGATACGC
AACTGCGTACCTTATACACACGTTTAGGTTACCTGCGTGAGCTTAACGACAGACGCCAAGTGATCCTGTCTAGCATCCAA
GCTCAGGGTAAGTTAACGCCAGAATTACAAAGGGCTATTGATGACGCAGACAGCAAGACACGTCTCGAAGATTTGTATCT
GCCCTTCAAACCTAAGCGCCGCACTAAGGGCCAAATCGCTATCGAAGCTGGGCTTGAACCATTAGCCGATGCCTTGCTGG
CTGACCGTAGCGCCGATGTTGAAACCAAAGCGGCGGTTTATATCAATAGCGAAGCGGGTTTTGTCGATGTGAAAGCTGTG
CTTGAAGGCGCGCGTTATATCCTGATGGAGCGCTATGCCGAAGACGCGGAATTACTGCGTAAAGTGCGTGAACATTTAAG
CCAAAACAGTGTGTTAGAAAGCCGCTTAATTGCAGGTAAGGAGAAAGAAGGCGCGAAATTCCGTGATTATTTCGAGCATA
CCGAACAGTTAGCTAAGATCCCTTCTCACCGTGCGCTGGCGATGCTGCGTGGCCGTAACGAAGGTTTTTTATCCCTATCT
ATGAATGCCGATCCTGCTGCCGAAGCGGGCCAAGGCAGTTATTGCGAAGTAATTATCTGCGATCACTTAGGGCTGAAACT
GGGCAATAGCAGCGTCGATCAATGGTTGAAAACTGTAGTGACGGCGACATGGCGCATTAAGATTGCGCTACAGATGGAAA
CCGAGTTTATTTCGCAAATGCGCGAACGCGCCGAAGCCGAAGCCATTAAAGTTTTTGCCCGTAACTTAGGTGATTTATTG
ATGGCCGCTCCTGCGGGCGCGAAAGCCACCATGGGACTCGATCCTGGTTTACGTACCGGCGTGAAAGTGGCTGTGGTCGA
TAACACGGGTAAGATGTTGTGCCATGCGACGATTTTTCCGCACGCACCGCAAAATCTGTGGGAAAAGTCGATCCGTACTT
TGGCGAACTTAGTCAAAATGCATAAGGTTGAATTGATTGCGATTGGTAACGGCACGGCATCACGGGAAACCGACAAGCTG
GCCGCTGAGCTGATTGCCGCAGTGAAAGATACCCATCCACAGTTGACTAAAGTGATGGTCAGCGAAGCGGGCGCGTCTGT
GTATTCGGCATCGGAATTGGCGGCGCTGGAGTTTCCTGATCTCGATGTCTCGATTCGTGGTGCTGTGTCTATCGCGCGTC
GTTTGCAGGATCCGTTAGCCGAACTGGTGAAAATTGAGCCTAAATCTATCGGTGTGGGTCAATATCAACACGACGTGAGC
CAAAGCCAATTATCGGGTTCGCTGGAAGCTGTGGTGGAAGACTGTGTAAACGGTGTGGGTGTGGATCTCAACATGGCCTC
TGCGCCTTTGTTGTCGCAAGTGGCGGGTTTAAACAAGACGTTAGCGAAAAATGTGGTCGATTATCGCGATGCCAATGGTC
AGTTTAAGAATCGTAAAGAGTTGCTGAAAGTGCCACGTTTAGGGCCTAAAGCCTATGAGCAAGCGGCGGGCTTTTTGCGT
ATTCGTGAAGGTGATAATCCACTCGATGCCTCGTCTGTGCATCCTGAGGCTTATTCGTTAGTGGAAACTATCGCTGAGAC
TAAGCAAGTGGAGCTGGCGAGCCTGATGGGTAACTCAGATCTACTGCGCAGCATCAAACCTGAAGAGTTCATTACGGCGG
AGTTTGGTTTACCAACTGTGACGGATATTTTAGCCGAGCTGGATAAGCCGGGACGCGATCCCCGTGGTGAGTTTAAAACC
GCCAAGTTTAAAGATGGTGTGGAAGAACTTAAGCACTTAAAACCTGAAATGGTGCTCGAAGGCGTAGTGACCAACGTGAC
TAACTTTGGTGCCTTCGTCGATATTGGCGTGCATCAAGATGGACTGGTGCATATCTCTTCACTGACCGACAAGTTTATTA
GCGATCCCCACACAATCGTGAAAGCGGGTGATGTGGTCAAAGTTAAAGTGATGGAAGTGGACGTTGAGCGTCGTCGTATC
GGTTTGAGCATGCGTTTGGATGAGGCTATCGACCAAAGCAAGTCGCAGCAAAGACCGCACAATCCTGCCAGAACTCATAA
CAGTAAGGCACCACAGTCAGCGAAACCTGCTGCGCGTCCTACGCAAAAGCAAGCACCTAAAGCACCTGCGAACGCGGCCA
TGGGCAATGCCTTTGCCGATGCCTTCGCTAAGCTGAAAAAGTAA

Protein sequence :
MQTNAHNIAQIIAQELNVREQQVAATITLLDDGATVPFVARYRKEATGGLDDTQLRTLYTRLGYLRELNDRRQVILSSIQ
AQGKLTPELQRAIDDADSKTRLEDLYLPFKPKRRTKGQIAIEAGLEPLADALLADRSADVETKAAVYINSEAGFVDVKAV
LEGARYILMERYAEDAELLRKVREHLSQNSVLESRLIAGKEKEGAKFRDYFEHTEQLAKIPSHRALAMLRGRNEGFLSLS
MNADPAAEAGQGSYCEVIICDHLGLKLGNSSVDQWLKTVVTATWRIKIALQMETEFISQMRERAEAEAIKVFARNLGDLL
MAAPAGAKATMGLDPGLRTGVKVAVVDNTGKMLCHATIFPHAPQNLWEKSIRTLANLVKMHKVELIAIGNGTASRETDKL
AAELIAAVKDTHPQLTKVMVSEAGASVYSASELAALEFPDLDVSIRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVS
QSQLSGSLEAVVEDCVNGVGVDLNMASAPLLSQVAGLNKTLAKNVVDYRDANGQFKNRKELLKVPRLGPKAYEQAAGFLR
IREGDNPLDASSVHPEAYSLVETIAETKQVELASLMGNSDLLRSIKPEEFITAEFGLPTVTDILAELDKPGRDPRGEFKT
AKFKDGVEELKHLKPEMVLEGVVTNVTNFGAFVDIGVHQDGLVHISSLTDKFISDPHTIVKAGDVVKVKVMEVDVERRRI
GLSMRLDEAIDQSKSQQRPHNPARTHNSKAPQSAKPAARPTQKQAPKAPANAAMGNAFADAFAKLKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 59