Gene Information

Name : hemC (Sbal195_4094)
Accession : YP_001556514.1
Strain : Shewanella baltica OS195
Genome accession: NC_009997
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 4827401 - 4828333 bp
Length : 933 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGTCTGAGAACCGCATACGTATCGCAACCCGCAAGAGTCCGCTGGCCATGTGGCAAGCTGAATTTGTTAAAGCCGAATT
AGAACGCATTCACCCAGGTATTGTGGTGGAATTGCTGCCAATGAGCACTAAAGGCGACGTTATCTTAGATACGCCGCTAG
CCAAAGTGGGCGGTAAAGGTTTGTTCGTCAAAGAGCTTGAAGTCGCTATGTTAGACGATCTTGCCGATATCGCAGTGCAC
TCAATGAAAGACGTGCCAGTCGACTTCCCTGAAGGCTTAGGCCTTGAAGTGATTTGCGAGCGCGAAGATCCCCGCGATGC
CTTTGTATCGAATTTATATAAATCGATCAGCGAATTACCATTAGGCGCAACTGTGGGCACCTCAAGCCTACGCCGTCAAT
GTCAGATACGAGCATCACGTCCCGACCTCATCATCAAAGATTTACGCGGTAACGTGGGTACGCGTTTAGCTAAGCTCGAT
AACGGCGAATACGATGCCATTATTCTTGCCGCTGCTGGCTTAATCCGTCTGAAATTGTCTGAGCGTATTGCCAGCTTTAT
TTCGGCCGAAGAATCCTTACCCGCCAACGGCCAAGGCGCCGTGGGTATCGAATGTCGCATCAACGACGAACGTGTTAAAG
CGCTACTGGCGCCATTAGAGCATTTAGAAACTCGCTACCGTGTTCTTGCCGAGCGCGCGATGAACACGCGCCTTGAAGGT
GGATGCCAAGTGCCGATTGGCGCATTTGCTGAAATCGATGGTGACGAGATGACGCTACGCGGCCTAGTCGGTAACCCAGA
TGGCAGTGAAATCATCGAAGGCGTGATCACAGGTCCAAAAACCGACGCCACGCAATTAGGTGTTGCCCTTGCTGAAGAGT
TACTCAGCAAAGGTGCCAAAAGCATTCTCGACGCCGTTTACGCTAAAGCCTAA

Protein sequence :
MSENRIRIATRKSPLAMWQAEFVKAELERIHPGIVVELLPMSTKGDVILDTPLAKVGGKGLFVKELEVAMLDDLADIAVH
SMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISELPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLD
NGEYDAIILAAAGLIRLKLSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRLEG
GCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTDATQLGVALAEELLSKGAKSILDAVYAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-71 60
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-71 60