Gene Information

Name : Sbal195_3858 (Sbal195_3858)
Accession : YP_001556278.1
Strain : Shewanella baltica OS195
Genome accession: NC_009997
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 4544706 - 4545326 bp
Length : 621 bp
Strand : -
Note : PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: shw:Sputw3181_3508 response regulator receiver protein

DNA sequence : 
ATGAGTCTTGCCTTACCTGTGTATTTAATCGATGACGATGACTCAGTGCGTCGCTCTTTGCGTTTTATGCTCGAAAGTTA
TGGCCTCAAGATCACCGACTTTGATAGCGCCGAAGCCTTTTTTACCGCCGTAGACTTAACCCTACCGGGTTGTGCGCTGG
TTGATGTGCGTATGCCAGGCTTGAGCGGCCCGCAGTTGCATCTTGAATTAGTCTCCAAAAATAGTCCGTTAGCTGTGATT
TATTTGACCGGACATGGCGATGTGCCTATGGCGGTTGAAGCGCTCAAACTCGGTGCGGTGGATTTTTTCCAAAAGCCCGC
CGATGGCGCTAAGTTAGCCGAAGCGGTCGTCAAAGCGTTGGAACATGCTAAAACGCATTATCAAGACAATCAGTATCTTG
AGACGTATCAAGCGCTCACGCCAAGGGAGCGGGAGATACTCAACCTGATTGCCCAAGGGTTGAAGAACCAAGAGATCGCC
GATAACCTCTGTATTGCCATGCGTACGGTCGAGATCCACCGTGCCAATTTGATGAAGGGCATGCAAGTAGGATCGCTGGC
GGAAATGATGCTGATCTATAGCCGGATCGCCGAACGCCTGCGCCTTGAAGATAACCGCTAA

Protein sequence : 
MSLALPVYLIDDDDSVRRSLRFMLESYGLKITDFDSAEAFFTAVDLTLPGCALVDVRMPGLSGPQLHLELVSKNSPLAVI
YLTGHGDVPMAVEALKLGAVDFFQKPADGAKLAEAVVKALEHAKTHYQDNQYLETYQALTPREREILNLIAQGLKNQEIA
DNLCIAMRTVEIHRANLMKGMQVGSLAEMMLIYSRIAERLRLEDNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 9e-33 44
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 9e-33 44
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 9e-33 44
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 6e-33 44
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 9e-33 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal195_3858 YP_001556278.1 two component LuxR family transcriptional regulator VFG0488 Protein 3e-33 44