Gene Information

Name : Sbal195_3584 (Sbal195_3584)
Accession : YP_001556006.1
Strain : Shewanella baltica OS195
Genome accession: NC_009997
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 4216863 - 4217672 bp
Length : 810 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: pin:Ping_3668 integrase, catalytic region

DNA sequence :
ATGAGTGTCAGTAAGTCAGGCTATTACGATTGGCATAAACGCCCTGCAAACGTGATAAGCCTTGAAACACTGAAGCTTTA
TCGCCTTGTTCGACAGCTATTTAAGCAAAGTCGAGGCAGCTTAGGGAATCGTGAAATGGTGAAGAAATTGCGCAAGGAAG
GCTACCAGGTTGGTCGCTATCTCGTTCGTAAAATTATGCACCGCCTTCGACTCAAAGTAACCCAGCGATGTGCTTACAAG
GTGACGACACAGCGAAAACACTCAGATGCAGTGGCTGATAACCTGTTAAACATGAACTTTAATCCAGTATCGGCTAATCA
GGTCTGGGCGAGTGACGTGACCTATTTAAAGACGGGTGAAGGCTGGATGTACTTAGCTGTGGTGATGGATTTATATTCAC
GCCGGATTGTGGGATGGCACATAGACAAACGCATGACCACAGATTTGATATCCAAGGCATTAATAAAAGCCTACAACCTG
CGCCAACCGGCCAGAGGGTTGGTATTTCACAGTGACCGAGGCTCGCAATATACCAGTAAGCAATTCGGTAGGCTGCTATC
GAGCTATGGTATCCGAGCCAGCATGGGTGATGTGGGTGCGTGTTGGGATAATGCCGTTGTTGAGCGTTTCTTTGGTAGCT
TGAAACACGATTGGATTTTTAAAGTTAATCAACCAACAAGGGAGTTTATGAAGCAAGATGTGACGGCTTACATGAAATAT
TACAACTTGGAGCGGCTTCATTCTGCTAATGACGCTCTGTCACCTGTAGAGTTTGAAAATTCTCAACTAAAAGTGTCCAG
TTTGGGTTGA

Protein sequence :
MSVSKSGYYDWHKRPANVISLETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRYLVRKIMHRLRLKVTQRCAYK
VTTQRKHSDAVADNLLNMNFNPVSANQVWASDVTYLKTGEGWMYLAVVMDLYSRRIVGWHIDKRMTTDLISKALIKAYNL
RQPARGLVFHSDRGSQYTSKQFGRLLSSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVNQPTREFMKQDVTAYMKY
YNLERLHSANDALSPVEFENSQLKVSSLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpB CAB61574.1 transposase B Not tested HPI Protein 6e-37 42
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 9e-37 42