Gene Information

Name : Sbal195_3303 (Sbal195_3303)
Accession : YP_001555725.1
Strain : Shewanella baltica OS195
Genome accession: NC_009997
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 3893306 - 3894460 bp
Length : 1155 bp
Strand : -
Note : KEGG: spc:Sputcn32_2778 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein

DNA sequence :
ATGAGCTTGAACATAAGTTGGTCTGTACTCGATACACAAATGATGAGCCGCGCGATTCAATTAGCGCGCAAAGGCTTTTA
CACCACGAGACCCAATCCCTGTGTGGGCTGCGTTATCGTTAAAGATAACCAGATTGTTGGCGAAGGTTATCATCAAAAAG
CGGGTGAACCCCACGCCGAAGTGCATGCGCTACGTATGGCAGGTGAACACGCCCGCGGCGCAACGGCCTATGTCACCTTA
GAGCCCTGCAGCCATTATGGCCGCACGCCGCCCTGCGCCTTGGCGCTGATCAATATTGGCGTTAAACGTGTGGTGGTAGC
GGTTGAAGATCCTAATCCGCAAGTCGGTGGTCGCGGTATTCAAATGCTGCGCGACGCAGGTATTGAAGTGGATGTGGGAT
TACATCGCGATGAAGCCTATGCCTTGAATTTAGGCTTTATGAAGCGGATGGAATCGGGTTTACCCAGAGTTACAGTCAAA
TTGGCTGCGAGTCTTGATGGTAAAACCGCGCTGTCTAACGGTGTGTCTAAATGGATTACCGGGCCTGAATCTCGCCGCGA
CGTGCAGCGCTTACGCTTACGTTCCTGCGCGTTGGTGACTGGGATTGAAACCATACTGGCGGACGATCCCTCACTCAATG
TGCGATATCAAGAACTTGGTGGCTTGAAAGACAGCGTAACCGAGGCGCAATTACTGCAGCCGTTAAGAGTGATACTCGAC
AGTCGCGCCCGTTTGCCCTTATCGGCCGCATGTTTGGCTATCGTATCGCCGATACTCTTGGTCTCGACCGTGGCTTATCC
CGCAGAGTTTCAAGCACAATTGCCCTCCCATGTGAGTTGCCTCGTGTTACCTGCAATTGCAGGTCGCGTATCCTTACCTG
AACTATTAAGCTATTTAGGCCAAAGCTGTAATCACGTGCTAGTGGAAGCGGGTGCAACCTTAGCGGGCGCTTTTTTAGCA
GAGGGGCTGGCCGATGAATTAGTGCTGTACCAAGCGATGAAAATCCTCGGTGGGCAAGGGCGTAATCTATTGCAGCTACC
CGATTATCAAACCATGGCGCAAATTCCTGCATTAACTTTGGTCGATGAGCGCAAATTAGGGCCAGATACCCGTTTAATCT
TGAGCGTTAAGCTTGATACTTCTTTATTTAATTAA

Protein sequence :
MSLNISWSVLDTQMMSRAIQLARKGFYTTRPNPCVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMAGEHARGATAYVTL
EPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRDAGIEVDVGLHRDEAYALNLGFMKRMESGLPRVTVK
LAASLDGKTALSNGVSKWITGPESRRDVQRLRLRSCALVTGIETILADDPSLNVRYQELGGLKDSVTEAQLLQPLRVILD
SRARLPLSAACLAIVSPILLVSTVAYPAEFQAQLPSHVSCLVLPAIAGRVSLPELLSYLGQSCNHVLVEAGATLAGAFLA
EGLADELVLYQAMKILGGQGRNLLQLPDYQTMAQIPALTLVDERKLGPDTRLILSVKLDTSLFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-70 51
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-70 51