Gene Information

Name : Sbal195_3270 (Sbal195_3270)
Accession : YP_001555692.1
Strain : Shewanella baltica OS195
Genome accession: NC_009997
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 3850171 - 3852741 bp
Length : 2571 bp
Strand : +
Note : This protein performs the mismatch recognition step during the DNA repair process

DNA sequence :
ATGAATGTAATTGATACCGATGATTTAGAAAAACATACTCCTATGATGCGTCAGTACTTGACCATGAAAGCAGAACATCA
CGACATGTTGCTGTTTTATCGCATGGGTGACTTCTACGAGTTGTTTTATGACGATGCTAAACGTGCTTCTGAGCTGTTAG
GCATTTCACTCACGGCGCGCGGTAAAAGTGGTGGCGATCCTATCCCTATGGCGGGACTGCCTTACCATGCTGTGGAAGGC
TATCTTGCGAAATTAGTTCAAATTGGTCAATCGGTTGCGATATGTGAACAAATTGGCGACCCTGCAACCTCTAAAGGGCC
AGTTGAGCGTAAAGTGGTGCGTATCGTCACGCCTGGCACCTTAACCGACGAAGCCCTGCTGCAGGAACGCCAAGACAATC
TATTGGCAGCGGTTTATCAAGGTAAAATCGGTTTTGGTTATGCCACTCTGGATGTTTCATCCGGGCGTTTTGTGATTGCC
GAGCTCGACACGCGAGAGTCATTAGAAGCTGAATTGCAACGCACTAATCCCGTTGAAATTCTCTACAGTGAAGACTTTGG
CGAACTAGGTCTACTAAACGGTTTTAAAGGTAAACGTCGTCGCCCTGAATGGGAATTTGATTACGACACTAGCATCAAGT
TACTACTGACTCAGTTTGGCACGAAAGACTTGCATGGTTTTGGTATTGCAGATGCACGTTTATCACTGCAAGCTGCGGGT
TGCTTAATGCAATATGTCAAAGACACACAGCGCACAGCCCTGCCCCATATCAATGCCATTACCCGCTTCAATCAAACCGA
TAGCATAGTGCTCGATGCGGCAACGCGCCGAAATCTAGAACTCACTCAAAACCTTGCCGGTGGCCGCGATAATACCTTAG
CCGCAGTATTAGATAACACGGCAACGCCTATGGGTAGTCGTATGTTGCAACGCTGGATCCATCAGCCGCTGCGAGATCCA
AAACACATCAAAGCACGCCAACAGGCGGTGACTGAATTACTCGATACCACCGCCCACGAAGGTCTGCATGAGCAGTTAAA
GGCACTTGGCGATATTGAACGTATCATGGCAAGACTCGCGCTGCGTACCGCTCGCCCAAGAGACTTTGCCCGTTTACGTC
AAGCGCTGGGCTTACTACCTGAATTACAACAGAGTTTAAGCACACTGAGCGCGCCGCACACGACTCAATTACGGCAACAC
ATAGGGGAATTCCCCGCTGAACAAGCCTTGCTTGAGCGCGCGATAGTCGATAATCCTCCCATGCTTATCCGCGATGGCGG
AGTGATCCGTGAAGGCTACAACAGCGAATTAGATGAATGGCGCGGTCTTAGCGAAGGTGCGAGCGATTACTTAGTACAAC
TCGAAGCCAGAGAAAAAGAACGTACAGGTATCAACACACTTAAAGTCGGCTATAACCGTGTACACGGCTATTACATCGAA
GTGAGTCGCTTGCAATCCTCGCAGGTGCCGCTCAATTATCAACGCCGTCAAACCCTTAAGAATATGGAGCGTTATATCAC
GCCCGAACTTAAGGAGTACGAAGAAAAAGTGCTCTCGAGCCAAGGTAAAGCGCTGGCACTCGAAAAGCAATTATGGGAAC
AGTTGTTCGATCTTATTCTACCCAAATTGCATGAATTACAAGCATTTGCTAGAGCGGCGGCGGAGCTTGATGTCTTGAGT
AACTTCGCCGAGCGCGCCGAAACCTTAGGCTACACTTGCCCTGAGCTGAGCCAAGATATCGGTGTACAGATAGAGGCTGG
TCGCCACCCAGTGGTGGAGCGTGTGAGTCAAACACCGTTTATCGCTAACCCCGTGACCTTGCATAATCAAAGACGTATGT
TGATTGTCACCGGACCTAACATGGGTGGTAAATCGACCTATATGCGTCAAGTCGCCTTGATCACGCTGATGGCCCATATT
GGTTGTTTTGTGCCAGCAGATCGCGCACTGATAGGCCCTATCGATCGTATATTTACCCGTATTGGCGCCTCAGACGATCT
GGCCTCTGGTCGTTCAACCTTTATGGTCGAAATGACAGAAACCGCCAACATTCTGCACAACGCCAGCGCCAGTAGCTTAG
TGTTAATGGATGAAATCGGCCGCGGAACATCCACCTATGATGGTTTATCACTTGCTTGGTCGGCGGCAGAGTATTTAGCC
CAGCAAGTCGGCGCTATGACCCTATTCGCCACCCATTATTTTGAACTAACTCAGTTACCTGAATTAATGGCTGGTGTTTA
CAATGTGCACCTCGATGCCATTGAACACGACGATACCATCGCCTTTATGCATGCAGTGCAAGAAGGCGCCGCTAGTAAAA
GCTACGGCTTACAAGTTGCGGCGCTTGCCGGCGTACCAAACAAAGTGATTAAAGCCGCTAAACATAAGTTGCAGCAATTG
GAGAGTCGCGATCATCAAGCCGAAGGAACGAGGACGCCTATTCAAAGCTTACTCGCGTTACCTGAACCGGTTGAGAATCC
AGCGCTAACGAAGTTAAGTAACATTAATCCCGATAACTTAACGCCAAAGCAGGCACTTGATTTGCTCTATGAGCTGAAAC
GTCTGAGCTAA

Protein sequence :
MNVIDTDDLEKHTPMMRQYLTMKAEHHDMLLFYRMGDFYELFYDDAKRASELLGISLTARGKSGGDPIPMAGLPYHAVEG
YLAKLVQIGQSVAICEQIGDPATSKGPVERKVVRIVTPGTLTDEALLQERQDNLLAAVYQGKIGFGYATLDVSSGRFVIA
ELDTRESLEAELQRTNPVEILYSEDFGELGLLNGFKGKRRRPEWEFDYDTSIKLLLTQFGTKDLHGFGIADARLSLQAAG
CLMQYVKDTQRTALPHINAITRFNQTDSIVLDAATRRNLELTQNLAGGRDNTLAAVLDNTATPMGSRMLQRWIHQPLRDP
KHIKARQQAVTELLDTTAHEGLHEQLKALGDIERIMARLALRTARPRDFARLRQALGLLPELQQSLSTLSAPHTTQLRQH
IGEFPAEQALLERAIVDNPPMLIRDGGVIREGYNSELDEWRGLSEGASDYLVQLEAREKERTGINTLKVGYNRVHGYYIE
VSRLQSSQVPLNYQRRQTLKNMERYITPELKEYEEKVLSSQGKALALEKQLWEQLFDLILPKLHELQAFARAAAELDVLS
NFAERAETLGYTCPELSQDIGVQIEAGRHPVVERVSQTPFIANPVTLHNQRRMLIVTGPNMGGKSTYMRQVALITLMAHI
GCFVPADRALIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNASASSLVLMDEIGRGTSTYDGLSLAWSAAEYLA
QQVGAMTLFATHYFELTQLPELMAGVYNVHLDAIEHDDTIAFMHAVQEGAASKSYGLQVAALAGVPNKVIKAAKHKLQQL
ESRDHQAEGTRTPIQSLLALPEPVENPALTKLSNINPDNLTPKQALDLLYELKRLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal195_3270 YP_001555692.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 68